Gene
| Gene Model ID | pfu_aug1.0_925.1_07757 |
|---|---|
| Locus | scaffold925.1 : 40618 ... 50445 : - |
| To GenomeBrowser | scaffold925.1:40618..50445 |
| Genes list of scaffold | scaffold925.1 |
| Synonym | pfu_aug2.0_33.1_10139 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_925.1_07757.t1 | 1 | 1 | GATA | 71 | 104 | 4.8e-17 | 61.0 | 4.1e-20 | 8.6e-17 | 60.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_925.1_07757.t1 | gi|285157761|gb|ADC35036.1| | GATA456a [Chaetopterus sp. MB-2010a] | 2.0e-38 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_925.1_07757.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_925.1_07757.t1 atgtcttatgatatagatcacacaaaaggtcttcatggaatgatgtatcctgattatagccatttgtcctatggagaatt tggagacacttatgcagccgcgcccccatatcaaacagcagacgcccatttacaggcatttggtccctggagtacaggag ggaaagggctaggaaaatcacgatcagcgtccagaagagttggtttgtcatgcgcaaactgtcacacgacgaccactaca ctatggcgaagaaacaacgagggtgaaccggtctgtaacgcatgcggactctactacaaattacacggggtaaatcgacc gttagcaatgaagaaagacggtatacagactagaaagcgaaaaccaaagaacctcgccaaaaacaaaaccccgaccaaat cagaacaagcagatgtaaaaccctcagtttctcccaattccatggcaacgagtcaaacaagccccatcagcacgccatct atgaacggatcagtttccaatataatgggacataactcatcaatgacttccttgacgtcacctggctcagaacatgagac ttctttagccagtcccgtaaatctagcatcagttccgcactattcgtcgccttctcctcctcgggcagttccggtaaaac tcgagaatgacaccatgcgcggccatggtgggactatgcattcagacggatctatgaacgcggttacagtgggtgccaat taa |
|
Protein
| Protein ID | pfu_aug1.0_925.1_07757.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_925.1_07757.t1 MSYDIDHTKGLHGMMYPDYSHLSYGEFGDTYAAAPPYQTADAHLQAFGPWSTGGKGLGKSRSASRRVGLSCANCHTTTTT LWRRNNEGEPVCNACGLYYKLHGVNRPLAMKKDGIQTRKRKPKNLAKNKTPTKSEQADVKPSVSPNSMATSQTSPISTPS MNGSVSNIMGHNSSMTSLTSPGSEHETSLASPVNLASVPHYSSPSPPRAVPVKLENDTMRGHGGTMHSDGSMNAVTVGAN |
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