Gene
| Gene Model ID | pfu_aug1.0_9263.1_09921 |
|---|---|
| Locus | scaffold9263.1 : 15215 ... 44605 : - |
| To GenomeBrowser | scaffold9263.1:15215..44605 |
| Genes list of scaffold | scaffold9263.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9263.1_09921.t1 | 2 | 1 | CPSase_L_chain | 27 | 122 | 3.4e-29 | 101.1 | 3.2e-18 | 5.2e-15 | 55.4 |
| pfu_aug1.0_9263.1_09921.t1 | 1 | 1 | CPSase_L_D2 | 127 | 290 | 0.0 | 202.4 | 0.0 | 0.0 | 201.4 |
| pfu_aug1.0_9263.1_09921.t1 | 1 | 1 | CPSase_L_D3 | 335 | 459 | 1.5e-39 | 134.5 | 2.7003e-42 | 4.4e-39 | 133.0 |
| pfu_aug1.0_9263.1_09921.t1 | 2 | 2 | CPSase_L_chain | 473 | 531 | 3.4e-29 | 101.1 | 3.6e-14 | 5.9e-11 | 42.4 |
| pfu_aug1.0_9263.1_09921.t1 | 1 | 1 | MGS | 651 | 753 | 8.3e-19 | 67.3 | 2.4e-21 | 4.0e-18 | 65.1 |
| pfu_aug1.0_9263.1_09921.t1 | 2 | 1 | Amidohydro_4 | 789 | 840 | 3.6e-16 | 60.0 | 2.3e-10 | 3.9e-07 | 30.3 |
| pfu_aug1.0_9263.1_09921.t1 | 1 | 1 | Amidohydro_1 | 789 | 840 | 1.4e-07 | 31.5 | 2.6e-10 | 4.3e-07 | 29.8 |
| pfu_aug1.0_9263.1_09921.t1 | 2 | 2 | Amidohydro_4 | 905 | 1024 | 3.6e-16 | 60.0 | 3.1e-09 | 5.1e-06 | 26.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9263.1_09921.t1 | gi|3024509|sp|Q91437.1|PYR1_SQUAC | CAD protein | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_9263.1_09921.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9263.1_09921.t1 atgcgcaagattgtggttgatgagacagaccctgaaagcattccacttactgaccccaacaagctccatctggtggcaga agtgtccatcaaggcaatcaaagctctgaaggaagagggaatacagacgatactgataaatcctaacatagcgacagtac agacatcaaaaggattggccgataaagtcttctttctgccaattacgttagaatacgtcacacagatcatcaggagtgag aggcctaacggtatacttctaacattcggtggtcaaacggcactgaactgtggtgtccagctaacgaagacaggtgtgtt agagaagttcaatgtccgagtgctcggaactcaggtcaggtcgatagaatggacggaggatcgtaaggtgtttgccgaca aaatgttggagatcgacgaacacgtggcacctagtgaggctgcctacacagtggaacaggcagttgctgctgcagagagg ctaggctatcctctacttatcagagcggctttcgctttaggcgggcttgggtccggttttgcagacaatcgggaacagct gcttaccctagttaacggagcgttcgctcacactagccaggtcctgatagacaagtcactgaaaggttggaaggaagtgg agtatgaagtgatcagggatgcctatgataactgtattacggtgtgtaacatggagaacgtagatccactaggaatccac actggagagtcgatcgtcgtagctccgagccaaaccctgactaacgtagagtataacatgctacgagccacagccattaa ggtcatacgtcaccttggagtggtgggggaatgtaacatacaatacgctctcaaccctgaatctcacgagatagggagtt ccatgaagagcgtaggagaggtgatggcgattggccggaagtttgaggaggcattccagaaagctctacgtatgatggac gaaaatatagtgggatttgatccctacacggcggaagtttccgaggaggagttacgtgacccgactgatcgtagaatgtt cgtgttggccagagcgttgaaggaaggatacagtatagacaagctgtatgaacttaccaagatcgacagatggttcctac acaagttcaaaaacataacggatcatctgtctgcattggaagtgtatagagggaagatgggtcaggttgcgacagaaatg ttgataaaggccaaacaacttggattttgtgacgaacaaatagccagggctgtagaaagcacacatttagttgtacgcaa ggtgcgatacaagctcggaatctgtccccacattaaacagatagatacagtagcagcagaatggccggcccagaccaact atctatacctgacgtacaacggagacacagacgatttaacattcccgggcggctatgtcatggtcattgggtcaggagtg tacaggatcggaagtagtgtagaatttgattggtgtgcggtcaagtgtatcacagaactcagaaaaatgggttacaagac aataatggtgaactataaccctgaaactgtcagtacagattacgatatgtgcgacagactttacttcgatgaaatatcat ttgaggtgccggtattttctttctcccgtttacaaggtgcggatgtacttctcggagtggagatggccagtacgggagaa gtggcatgcttcggcgagaatcgatatgaggcgtacctcaaggcacaacttagcactggattcaaaatacccaaaaagaa catactcatctctataggtagcttcaagatgattctccagatatttcatttgatagctagactacagacatcacatactt tggcgacattttccattgtgacgtcacatacgaataattggaaacacaacgtaaagcctacaatttactatgatgtaaca attcaaaagtttgccaagcacaagaatgagttattatctggtatgagggcgttacagaatctaggatataatctgtatgc tagcatgggaacagccgacttctacaacgaacatggcctgaacataaagcctgttgattggccgtacgaggacacagggg aaagtaaacgtaatggtgtagagcagcacacaatagccaactatctgtctgagaatatgttcgatttggtgataaatctg ccactgaggaattctgggacgtatcgagcctcaacatttatgacgcagggctacaagacacggcgaatggctgtggatta ctccgtccctttgataacggacgttaagtgtactaagatgctgatagaggccctgagaatgatgaagggttcccctccct taaagatgcacgtggactgtatatcatcacatagggttgttagactaccaggtcttatagatgtccatgtacatgtacga gagccaggggccacccataaagaagactggggtagtgccactgccgccgcactagctggtggcatcactatgatcctagc gatgcccaacactaaccccccaactgtggatgatgctgcactaacactaacacaaaaattggccagacttggtgcacggt gtgactatggtattttcctcggtgctagcagtacaaactaccagactcttcctcagattgccagtaaggcctgcgctctc aaaatgtacctgaacgagacattcaccactctgaaactggacgatctctcagtatggatgaagattctggtcatcaaagc agccaaggagagaggcctctctgtaacctgcgaggtggctccacatcacttattcctgacctcagaggacctcgagaaaa taggtcacatgaggggtcaggtcaaacctcctctggtcttgaaagaagatcaagatgcattgtgggaaaatatggatatc atagactgcttcgctactgaccatgctccccatgctgtagaggagaagaacagtgacaaaccccctccaggattcccggg actagagaccatgttacctatgttactgacagcagtgtatgatgggcggttaacactggacgacatcatactacgtcttc acaccaacccaaggaggatctttaacctaccagaacagcccgacacgtacatagaggtggacttagaacaccagtggacc atccctgattatatgccgttcacaaagtcaaagtggacgccatttgccgggaagagtgtagtggggaaggtggtgagggt ggtgcttagaggggaagtggcatatatagaaaacgaggtactagtacagaaaggctacggtacagacattaagtcttacc caacccaaggtaccgtacatgtgggtagtggcgaccagctccaagtccagataccgacggtaacgtactccggtacctca caaccgtcatccgaaccgtccagtcctaggaaagtatctgaccgcaaggccaaggtcataggggaaccaatgtatgaaaa gtttatgtaa |
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Protein
| Protein ID | pfu_aug1.0_9263.1_09921.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9263.1_09921.t1 MRKIVVDETDPESIPLTDPNKLHLVAEVSIKAIKALKEEGIQTILINPNIATVQTSKGLADKVFFLPITLEYVTQIIRSE RPNGILLTFGGQTALNCGVQLTKTGVLEKFNVRVLGTQVRSIEWTEDRKVFADKMLEIDEHVAPSEAAYTVEQAVAAAER LGYPLLIRAAFALGGLGSGFADNREQLLTLVNGAFAHTSQVLIDKSLKGWKEVEYEVIRDAYDNCITVCNMENVDPLGIH TGESIVVAPSQTLTNVEYNMLRATAIKVIRHLGVVGECNIQYALNPESHEIGSSMKSVGEVMAIGRKFEEAFQKALRMMD ENIVGFDPYTAEVSEEELRDPTDRRMFVLARALKEGYSIDKLYELTKIDRWFLHKFKNITDHLSALEVYRGKMGQVATEM LIKAKQLGFCDEQIARAVESTHLVVRKVRYKLGICPHIKQIDTVAAEWPAQTNYLYLTYNGDTDDLTFPGGYVMVIGSGV YRIGSSVEFDWCAVKCITELRKMGYKTIMVNYNPETVSTDYDMCDRLYFDEISFEVPVFSFSRLQGADVLLGVEMASTGE VACFGENRYEAYLKAQLSTGFKIPKKNILISIGSFKMILQIFHLIARLQTSHTLATFSIVTSHTNNWKHNVKPTIYYDVT IQKFAKHKNELLSGMRALQNLGYNLYASMGTADFYNEHGLNIKPVDWPYEDTGESKRNGVEQHTIANYLSENMFDLVINL PLRNSGTYRASTFMTQGYKTRRMAVDYSVPLITDVKCTKMLIEALRMMKGSPPLKMHVDCISSHRVVRLPGLIDVHVHVR EPGATHKEDWGSATAAALAGGITMILAMPNTNPPTVDDAALTLTQKLARLGARCDYGIFLGASSTNYQTLPQIASKACAL KMYLNETFTTLKLDDLSVWMKILVIKAAKERGLSVTCEVAPHHLFLTSEDLEKIGHMRGQVKPPLVLKEDQDALWENMDI IDCFATDHAPHAVEEKNSDKPPPGFPGLETMLPMLLTAVYDGRLTLDDIILRLHTNPRRIFNLPEQPDTYIEVDLEHQWT IPDYMPFTKSKWTPFAGKSVVGKVVRVVLRGEVAYIENEVLVQKGYGTDIKSYPTQGTVHVGSGDQLQVQIPTVTYSGTS QPSSEPSSPRKVSDRKAKVIGEPMYEKFM |
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