Gene
| Gene Model ID | pfu_aug1.0_931.1_29493 |
|---|---|
| Locus | scaffold931.1 : 52976 ... 59803 : + |
| To GenomeBrowser | scaffold931.1:52976..59803 |
| Genes list of scaffold | scaffold931.1 |
| Synonym | pfu_aug2.0_448.1_27414 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_931.1_29493.t1 | 2 | 1 | TcdA_TcdB | 81 | 120 | 2.5e-06 | 26.2 | 5.3e-07 | 0.004 | 15.7 |
| pfu_aug1.0_931.1_29493.t1 | 1 | 1 | Gly_transf_sug | 93 | 175 | 2.0e-16 | 60.2 | 6.9e-20 | 5.1e-16 | 58.9 |
| pfu_aug1.0_931.1_29493.t1 | 2 | 2 | TcdA_TcdB | 146 | 165 | 2.5e-06 | 26.2 | 5.1e-06 | 0.038 | 12.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_931.1_29493.t1 | gi|32475986|ref|NP_868980.1| | 8.0e-34 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_931.1_29493.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_931.1_29493.t1 atgggaaatatcgtgaacaccatcatgaagctggtcttggctgttagccgtcctgatactctaagaacgttaggtgttgg tgcaatatttattacacttcttcatttcattatcaagtttgaacaagtgaaagagtatggagacttttacaatttgtaca ttcctatagaggaggaatttgttccgttaggtatatccagccccgaggacttcccaacaagtggaccttacagaattccg aagataattcaccaaacgtggaaaaataggaacatacccagtaagttctcaaaatgggtgaagtcatgggtgaaaaatca tccagactggcagtactatctatggacagatgacagtgctcgtaaactgatcagagaaagacaccctcatttactggatg tttttaatggctatgaggatggaatcagaagggctgattctctgaggtatattatactgtatgagtttggaggtgtgtat gcagacatggacatggagagtctaaagtctctggatccatttgcaaggaagtatgcatgttttctaggtcaggagccata cgaacatcccatcctggacgggggttatgaaggactggtcatcaatgccttgatggcatcacgtgcaaaacatccgtata tgaagcttctaatggaaaatctgcccaagtaccaaaatatgtggagtgtaatggacagtacaggaccacattttgtcact ttacatttcagagattttaacaagaaccaccctcagcccgcagatcatataaacggaacatacctagctccgtccgagta tttctttcctacagttgatccttcaaaatatttttggtttaatgcacaatgtggaaaatttatgaaattaaagcccattc agcagaaagcctgcaagtctttaaaagttaacaaattgaagaaaaagccattgtcattttcctatacagatcatcattgg gaacatacctatatagatttcagactttctttgaaaggtcctgttgatatcaaacacctagtcccacatgctgtaatata ctaa |
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Protein
| Protein ID | pfu_aug1.0_931.1_29493.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_931.1_29493.t1 MGNIVNTIMKLVLAVSRPDTLRTLGVGAIFITLLHFIIKFEQVKEYGDFYNLYIPIEEEFVPLGISSPEDFPTSGPYRIP KIIHQTWKNRNIPSKFSKWVKSWVKNHPDWQYYLWTDDSARKLIRERHPHLLDVFNGYEDGIRRADSLRYIILYEFGGVY ADMDMESLKSLDPFARKYACFLGQEPYEHPILDGGYEGLVINALMASRAKHPYMKLLMENLPKYQNMWSVMDSTGPHFVT LHFRDFNKNHPQPADHINGTYLAPSEYFFPTVDPSKYFWFNAQCGKFMKLKPIQQKACKSLKVNKLKKKPLSFSYTDHHW EHTYIDFRLSLKGPVDIKHLVPHAVIY |
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