Gene
| Gene Model ID | pfu_aug1.0_931.1_29496 |
|---|---|
| Locus | scaffold931.1 : 72445 ... 89265 : - |
| To GenomeBrowser | scaffold931.1:72445..89265 |
| Genes list of scaffold | scaffold931.1 |
| Synonym | pfu_aug2.0_448.1_27415 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_931.1_29496.t1 | 1 | 1 | SH3_1 | 59 | 105 | 4.0e-11 | 42.1 | 1.9e-14 | 6.9e-11 | 41.3 |
| pfu_aug1.0_931.1_29496.t1 | 1 | 1 | SH3_9 | 60 | 103 | 9.5e-09 | 34.7 | 4.7e-12 | 1.8e-08 | 33.8 |
| pfu_aug1.0_931.1_29496.t1 | 2 | 1 | RasGAP | 241 | 300 | 2.0e-17 | 63.5 | 1.3e-10 | 4.7e-07 | 29.6 |
| pfu_aug1.0_931.1_29496.t1 | 2 | 2 | RasGAP | 303 | 340 | 2.0e-17 | 63.5 | 1.9e-11 | 7.2e-08 | 32.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_931.1_29496.t1 | gi|307187657|gb|EFN72629.1| | Ras GTPase-activating protein 1 [Camponotus floridanus] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_931.1_29496.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_931.1_29496.t1 atgagaaaaataatgatatcagcaatatgcggagactactacattgggggtcggcgtttcgacagcctgtctttgttaat aggttattatacatcgtgttcctatctgctgaaaggagagcaactcaagtttcccgtttctcctccagagcctgtggatg ataggcgtaaagttgtagctgtatatcctttttcgaaaatgccagagacagatgaattaagttttgataaaggtgacatt tttattgtcctgaatgagatgggtgatggctggctgtgggccaagtcccagagaacaggagaggagggtcaaatacatga agccttagtggacgatatgaatgaaaatgttgatcctgttcacagtctcccatacttccatgcagacattaccaaggaga tcgctgtggaaaaattgcgagactctcaagtgactgtgccatttgaagatttaaagaatgtggactgttatgacaagtgg agccccttacatcctgttagtcaaggtgtacgtggggagcagggctcactgagaatcagggctcggtacctgcatgaaat tattatgccagaagataaatactcgacacttaaggagttgttattgaatggtgatctcagcaatattttagaactgttta caatatgtggtgcagacagaattcctttggcaaagtcattattacagatatttaggcatgagaagcaagaaaaagtcatc ttaaagacaatgaatgatttagaaatagctagagaggatgaagtttcaacattatttagagctacttctctggctacaac actaatggaccaatatatgaagatgactgcctcccagtttgtcagtatggccgtcaaaggctgcatcgtcagaatactgg atagtaaactttcttgtgagaggagtgctgcggctaagtggcctcaggatgagagtgtgcgtacaagagtagtcagtggt tttatatttcttcgtttattatgtcctgcaattctcaaccccaaatctttcaatttaataactggtacttgtttactcct gggtggagagagcgcaaatgtagagtaa |
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Protein
| Protein ID | pfu_aug1.0_931.1_29496.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_931.1_29496.t1 MRKIMISAICGDYYIGGRRFDSLSLLIGYYTSCSYLLKGEQLKFPVSPPEPVDDRRKVVAVYPFSKMPETDELSFDKGDI FIVLNEMGDGWLWAKSQRTGEEGQIHEALVDDMNENVDPVHSLPYFHADITKEIAVEKLRDSQVTVPFEDLKNVDCYDKW SPLHPVSQGVRGEQGSLRIRARYLHEIIMPEDKYSTLKELLLNGDLSNILELFTICGADRIPLAKSLLQIFRHEKQEKVI LKTMNDLEIAREDEVSTLFRATSLATTLMDQYMKMTASQFVSMAVKGCIVRILDSKLSCERSAAAKWPQDESVRTRVVSG FIFLRLLCPAILNPKSFNLITGTCLLLGGESANVE |
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