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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_93144.1_28016
Locus scaffold93144.1 : 1 ... 1713 : -
To GenomeBrowser scaffold93144.1:1..1713
Genes list of scaffold scaffold93144.1
Synonym pfu_aug2.0_111.1_03653

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_93144.1_28016.t1 1 1 DNA_pol_B_2 366 508 1.3e-12 47.1 3.1e-16 2.3e-12 46.3

Transcript
Transcript IDpfu_aug1.0_93144.1_28016.t1
Definition-
>pfu_aug1.0_93144.1_28016.t1
acctacatacggacaaggaaacattcagaaaaggaaagaagtccgttgtcagtatcgtgaatgacgaggaccacatgtgt
ctgtcccgggctatcgttgtgaccatagtccatgccaacaaaccagaaaaggaatccgaggaatggaaaaaggagtggga
aaggatcagaaaacctaaagactacaagttgcagaaagaaagagctaaaacactatgcgaccaggcaggggtgtctagcg
agcatgggtgcggtccagctgaatgggagaaattccaaaaagtcctgactcccaactacagactgaaaatctatcaacag
aacgctgtagccaaaactttgaagtttgacgttctgtacaaagggtccgcaaccaatgacagaatccaacccaagatact
gcacgtcctctactcggacaatcattacgatgccatcacctccatgcctggtctggtagaatgccaatactattgcgact
tttgtgacgtggggtacagaaatgctgacagtcatcgcaacgcctgtcctatccgctgttactggtgcctggcttcaccc
ccttgcccatgggaagacgctaacgtggaatgtaacagttgtggcggtaatttccatagtatgagatgttactggaacca
tttcaaacccaacaagtccggtaatagcgtatgcgacctgatgactagatgcgaagaatgcggcagttggattactaaac
gtctgaagcctgtccacaaatgtgccgataaagaccactattgtagcatctgtaaggagcaggtggaagagggacacttg
tgctacgtgcagacggtaccaatcccgaaaaagaaaaagaagaagagcgacctatacatcttttacgatttcgagtgcac
ccaggaaaccggagagcatatccccaacttctgcgtggtacaccgggcctgtgaagcttgcattaacctacctatcgaag
attactgcgagaaatgttccaacctaccgggaggcggacgcgaagtcatttttaagggggagaccaccttggatcaattc
atggtttggttgttcaacacctgttccaatgacggtaaacacaaaaaaatgtgtcatgagggagccacagccatagccca
taacatgaagggatacgacgggcagtttatcctccatttcttagtcaaccgagcctgcattaaaccagatgtactgatga
atggcgccaagatcatgacgatgtctgcgcacggtgtgaggtttgtggattcctacaatttcttgcccgatgccttgagc
cgtctaccatctgcctttggactgaccgagttgaagaagggttacttccctcatctcttcaacactacagcaaaccaaaa
ctatgtgggactgtatccacctatcgagacctacatacccgacgggatgagaggtaaagcccgagaggagttcctggctt
ggtacaacgacaaagtacagaggagagaggagttcaactttgccaaagagatggaggattattgtcgatcggacgtagac
atcctgagacgtt

Protein
Protein IDpfu_aug1.0_93144.1_28016.t1
Definition-
>pfu_aug1.0_93144.1_28016.t1
LHTDKETFRKGKKSVVSIVNDEDHMCLSRAIVVTIVHANKPEKESEEWKKEWERIRKPKDYKLQKERAKTLCDQAGVSSE
HGCGPAEWEKFQKVLTPNYRLKIYQQNAVAKTLKFDVLYKGSATNDRIQPKILHVLYSDNHYDAITSMPGLVECQYYCDF
CDVGYRNADSHRNACPIRCYWCLASPPCPWEDANVECNSCGGNFHSMRCYWNHFKPNKSGNSVCDLMTRCEECGSWITKR
LKPVHKCADKDHYCSICKEQVEEGHLCYVQTVPIPKKKKKKSDLYIFYDFECTQETGEHIPNFCVVHRACEACINLPIED
YCEKCSNLPGGGREVIFKGETTLDQFMVWLFNTCSNDGKHKKMCHEGATAIAHNMKGYDGQFILHFLVNRACIKPDVLMN
GAKIMTMSAHGVRFVDSYNFLPDALSRLPSAFGLTELKKGYFPHLFNTTANQNYVGLYPPIETYIPDGMRGKAREEFLAW
YNDKVQRREEFNFAKEMEDYCRSDVDILRR

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