Gene
| Gene Model ID | pfu_aug1.0_9317.1_46021 |
|---|---|
| Locus | scaffold9317.1 : 3928 ... 14675 : - |
| To GenomeBrowser | scaffold9317.1:3928..14675 |
| Genes list of scaffold | scaffold9317.1 |
| Synonym | pfu_aug2.0_1258.1_28164 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9317.1_46021.t1 | 2 | 1 | NCD2 | 80 | 144 | 2.9e-23 | 82.4 | 8.9e-07 | 0.013 | 15.2 |
| pfu_aug1.0_9317.1_46021.t1 | 2 | 2 | NCD2 | 135 | 196 | 2.9e-23 | 82.4 | 1.1e-23 | 1.6e-19 | 70.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9317.1_46021.t1 | gi|91076156|ref|XP_970832.1| | 6.0e-16 |
Transcript
| Transcript ID | pfu_aug1.0_9317.1_46021.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9317.1_46021.t1 atgactttattatcgggaatgttcggagctggctttcagagttctgtgtcagcgtctgctgtgatgtcactactaacatc aaatccagttcccgcgacgacagcgagtcttcctacggtgatttcctccgtcacacgacaagaacctgctcccgcggctt acacggtgcaaacaacaaccaacggcaactcatcgtcatggttacaagatctgccaaccaatcagagatcagttagccca ggtcctctaagcacatcaggctctggaacttcaatacaggatgactcaaaagatggggaaaagaagacctcctctccacc actatctacacccatgctggcagatagtcagatcagtgctatagcagaagccgcctccaaactagctaaagagttgcccc cctttgatgccaaaagactcaatatgaagaagccaattaatgtagaaataatgatctcggtaaatgaagctgcggcacaa ctctgccgtcatatgccaacattgttgacacgacgagaagatttattccccttggctcggcaagttgtacgagacagcgg ctaccaatactcaaaaggtcactcaaggtcagtatga |
|
Protein
| Protein ID | pfu_aug1.0_9317.1_46021.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9317.1_46021.t1 MTLLSGMFGAGFQSSVSASAVMSLLTSNPVPATTASLPTVISSVTRQEPAPAAYTVQTTTNGNSSSWLQDLPTNQRSVSP GPLSTSGSGTSIQDDSKDGEKKTSSPPLSTPMLADSQISAIAEAASKLAKELPPFDAKRLNMKKPINVEIMISVNEAAAQ LCRHMPTLLTRREDLFPLARQVVRDSGYQYSKGHSRSV |
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