Gene
| Gene Model ID | pfu_aug1.0_9330.1_02744 |
|---|---|
| Locus | scaffold9330.1 : 1 ... 41480 : - |
| To GenomeBrowser | scaffold9330.1:1..41480 |
| Genes list of scaffold | scaffold9330.1 |
| Synonym | pfu_aug2.0_360.1_00649 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9330.1_02744.t1 | 5 | 1 | ABC_membrane | 53 | 225 | 1.2e-39 | 136.3 | 7.0e-25 | 3.5e-21 | 75.8 |
| pfu_aug1.0_9330.1_02744.t1 | 5 | 2 | ABC_membrane | 422 | 470 | 1.2e-39 | 136.3 | 1.6e-06 | 0.0081 | 15.6 |
| pfu_aug1.0_9330.1_02744.t1 | 5 | 3 | ABC_membrane | 531 | 583 | 1.2e-39 | 136.3 | 0.33 | 1600.0 | -1.8 |
| pfu_aug1.0_9330.1_02744.t1 | 5 | 4 | ABC_membrane | 676 | 836 | 1.2e-39 | 136.3 | 4.1e-20 | 2.0e-16 | 60.2 |
| pfu_aug1.0_9330.1_02744.t1 | 5 | 5 | ABC_membrane | 946 | 1003 | 1.2e-39 | 136.3 | 0.054 | 270.0 | 0.7 |
| pfu_aug1.0_9330.1_02744.t1 | 1 | 1 | ABC_tran | 1100 | 1199 | 4.6e-14 | 52.8 | 4.5e-17 | 2.2e-13 | 50.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9330.1_02744.t1 | gi|47209056|emb|CAF93260.1| | unnamed protein product, partial [Tetraodon nigroviridis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_9330.1_02744.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9330.1_02744.t1 tgtagtaatgaaagcatacaaacggacgatcggaattaaagatctatgggaacagactccggacttacagtcagacattt gtatccctgaattagaaaaggaatggtacaaggaagttgaacagtgtaaaagatacatcatcgctcttatcgaaaacaaa gaccccacccagccgacagactggactggatatactttggctattctatttttcttgtccggaatggggactacagtatt cttcagtcaagcaggttttcaaatgatgagacttggtttacaagtcaaaacagctgtcattggtttgatatatcgaaagg ccttaacaatgagcaatgcatccaagaagaactacaccgttggtgacatcgtcaacttaatgtcagtggattgtcagcgt gtccaaaatggcttccaattacaatacgaggtagtgtctttcttcgtcatggtcggtctgggcctgtacctggtgtggat agagatgggcctagccaccctgggctgcatggctgccatacttatagtggctggtcttaacatcttgatgggaaaaattc agcagaaaattcaattagccattctgaaaatgaagagtagcagaattagattgcttaaagaagtacttaatggtattaag ctgattgtgtcactcggacgaattcaagctttcttgtggaaagaggatttagatctcagcaatgtttcaaattcagataa ttcagatcatgctatttccatagaaaatggttcatttacatgggacagagaagacccgaatgttacactgaaaaaaaaat catcaagagctttccaaaaggatgacaaacagtcgtctgtcaggctcgcgaagggcgggatagctgacaaggatcccaaa cgtgagattcagagacagatttcagagaatctatcggctctcacagagagcttgtcacgtggtaacgtagccacactcag tgacgccatctctgatgggacaaaccttccttacgacgaggagaaggacaataaagacagaaacaaaaattcagctggta atcttacaacggaggaaactacaaaaattggatcgacaaggatcttggttacccatggtatacattggttaccgatggtg gatacaataatagtcatggagaaagggcggatccgggaggtgggaacatatgacgaactccttcaacgtaaggatgcctt tgcccactttctacaaacctgtctgctccagaatgatccagacgaagatggcgaggataaagaaactcgtcagctgaaaa gaattgagtctgttaccagatctccaattttcaatcacttcagcgagacaatttccggtacaagtctcatccgggcatat aaagctactgatcgtttcattaccgaatctaacaacagagttgacacaaattcttccttctttttcggtgcaattacagg atcttgtccgcggtcaaggccaatggtattcaatgttcttcaaatgttgacgaataagcacgaaacacataatgatgacg tgttatcgggagatgctccagctttcacgccctgtttccaagacacggtcctggtgtatataccatttggatggctcctt gtctccatgccgttataccttcgctttctcttgaagaaaccgcctggaccagatttaccagtttcggcattgagcttatc taaatcaccatcttgcccaagcagtatcctgtactatgtttactttgctgcaattatagtacagattgtgctacattctt tcatcgacaaagaccgcgaacaagaatacactaacgtggatgagaaatcggactgtccagagagtaaggcctctgtcatg aacaagcttacattctggtggttgaatggtgtcgtcacaacagcttacaagaggacgatagggataaaagacctttggaa gcaaactccagacttacagtcagacacatgtatacctgctatagagaaggagtggtatagggaggtcgagagatgtaaaa gtttcattatcgactatattgagagtaaggggccaaatgatagtacagactggaggggctacacattagccgtcttgttt ttcttgtttgggattataatgtccgttttcttcagtcaatcgggattcattatgatgagattgggactaaaagtgaaatc agctctgattggtctgatttatcggaaggctttgacaataagtaatgcatccaaaaagaactattcagttggtgacatag tgaatttaatgtcagttgactgtcaacgtattcaaaatgggtttcaacttcaacatgagatagtttcatttgtggacgtc atgatcctaggtttgtacctagtgtggatggaaatgggtacggcaacattaggaagtattgccattattatcatttttgg tggtctgaacctcatgttagggagatttcagcagatatatcaaactgtcatactgaaaatgaaaagcagtcggatcaggc ttctgaaagaagttctgaatggcatcaaggcatcaaaagcggcgatgctcaatgacaaacatcaacacattacgacggct gtattccaagaaaacacatctggcagatccatacagagacaggtgtcggagaacctctctgccctgacggagagtctacc acacggtaacgtcacggcattaaacgcggcactgaccgagggcggtccgctgtatgatgatgaatcaacagacaagaaag cagcgggatccttaaccacagaggaaactacacaagttggatcggtcaagctaagcgtatttgtgtcctatgtaaaagcc atgggatatattggaacatttgtttcgctaacttcgcttatgttgtttcatggattgacagcgtacggaaattatgtctt aacattttggacagaagatgaacttctcaacaaccaaagtctatcaaatactagtgaatatatggacagaaatatttatt atctcagcgtgtatggaatcttgggattcttccaggctgccctattcgcaattctacaaactggaattaacggtgccgat gtgggcctgtcgcttacttactcgatgcagattatctatacattaaactttgtgatacaatcggtcagcgagatggaaat gaatgtagtatcagcagaacgtgtggaagaatattcggatcttccatcagaggtacaatgtcgaatttgggctgagtgga taaaacctagtaatcgcccacgatctacatggccgggaaccggaaacattgattttaaggagtatactacaagatacaga ccggaactagatttggtccttaaaggaataaattgtagcattcgcaatggagaaaagattggaattgtgggtaggacagg tgctgggaaatcgtccatgactctgtcactattcagacttatagaggctgctggaggtgaaatcaacattgacagcttgt gtattgctgacatcggccttcatgaccttaggtcgaaagttaccatcctccctcaggatcctatactattttctgggtcg ttgaaagagaatttagatcctctgaacaagtacagcgatccagaaatgtgggttgccattgaaagagcccatcttaaacc ttacatcatgactcaacctgcccaattaaacatggagtgtggagaaggtggttctaattttagtagacgtcttcttttcg ttgcaacggaacgacgagctacacgaactcttgtgttgtga |
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Protein
| Protein ID | pfu_aug1.0_9330.1_02744.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9330.1_02744.t1 VVMKAYKRTIGIKDLWEQTPDLQSDICIPELEKEWYKEVEQCKRYIIALIENKDPTQPTDWTGYTLAILFFLSGMGTTVF FSQAGFQMMRLGLQVKTAVIGLIYRKALTMSNASKKNYTVGDIVNLMSVDCQRVQNGFQLQYEVVSFFVMVGLGLYLVWI EMGLATLGCMAAILIVAGLNILMGKIQQKIQLAILKMKSSRIRLLKEVLNGIKLIVSLGRIQAFLWKEDLDLSNVSNSDN SDHAISIENGSFTWDREDPNVTLKKKSSRAFQKDDKQSSVRLAKGGIADKDPKREIQRQISENLSALTESLSRGNVATLS DAISDGTNLPYDEEKDNKDRNKNSAGNLTTEETTKIGSTRILVTHGIHWLPMVDTIIVMEKGRIREVGTYDELLQRKDAF AHFLQTCLLQNDPDEDGEDKETRQLKRIESVTRSPIFNHFSETISGTSLIRAYKATDRFITESNNRVDTNSSFFFGAITG SCPRSRPMVFNVLQMLTNKHETHNDDVLSGDAPAFTPCFQDTVLVYIPFGWLLVSMPLYLRFLLKKPPGPDLPVSALSLS KSPSCPSSILYYVYFAAIIVQIVLHSFIDKDREQEYTNVDEKSDCPESKASVMNKLTFWWLNGVVTTAYKRTIGIKDLWK QTPDLQSDTCIPAIEKEWYREVERCKSFIIDYIESKGPNDSTDWRGYTLAVLFFLFGIIMSVFFSQSGFIMMRLGLKVKS ALIGLIYRKALTISNASKKNYSVGDIVNLMSVDCQRIQNGFQLQHEIVSFVDVMILGLYLVWMEMGTATLGSIAIIIIFG GLNLMLGRFQQIYQTVILKMKSSRIRLLKEVLNGIKASKAAMLNDKHQHITTAVFQENTSGRSIQRQVSENLSALTESLP HGNVTALNAALTEGGPLYDDESTDKKAAGSLTTEETTQVGSVKLSVFVSYVKAMGYIGTFVSLTSLMLFHGLTAYGNYVL TFWTEDELLNNQSLSNTSEYMDRNIYYLSVYGILGFFQAALFAILQTGINGADVGLSLTYSMQIIYTLNFVIQSVSEMEM NVVSAERVEEYSDLPSEVQCRIWAEWIKPSNRPRSTWPGTGNIDFKEYTTRYRPELDLVLKGINCSIRNGEKIGIVGRTG AGKSSMTLSLFRLIEAAGGEINIDSLCIADIGLHDLRSKVTILPQDPILFSGSLKENLDPLNKYSDPEMWVAIERAHLKP YIMTQPAQLNMECGEGGSNFSRRLLFVATERRATRTLVL |
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