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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_9350.1_53342
Locus scaffold9350.1 : 11466 ... 25338 : +
To GenomeBrowser scaffold9350.1:11466..25338
Genes list of scaffold scaffold9350.1
Synonym pfu_aug2.0_22506.1_23169

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_9350.1_53342.t1 gi|61098310|ref|NP_001012837.1| probable palmitoyltransferase ZDHHC23 [Gallus gallus] 2.0e-30

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-4cell 1
8-16cell 1
egg-Dshape 1
>Adult tissues
maleGonad 1

Transcript
Transcript IDpfu_aug1.0_9350.1_53342.t1
Definition-
>pfu_aug1.0_9350.1_53342.t1
atgagtgaggaggctttgtgctgttgtgagtttgaggatgaaaaaggggagagaagtcatattttggcatgctgctgtaa
ttgtgaagctgtagaccaagcatgtgacagtttcattacctgcaaaggaataccagatgagatagcatggcgtatcatca
aaacatttgatgacagatgccgaattccaggattcctcggtggtggagccaagaaactcccgatcggcagcacagtgcct
gttatagccatccctctctgtctgacaataggcactattggtccaatctttacgtgccttgttctgctatcaatgccgat
ctgtatgctttacttttacggactatggagaaggaattctacacggcctcgcactcagtttttcttcgcctggggagtgg
tgtctgttctgatgatagctgtgtgttttgaactgcttgtcatgccaaaggcagagaacattttttttcagaatatattt
ctattaggtggattatttgccatgttttactatctaagaaaagcaaggaaaaggataagtgaaatctattcaccacaatt
ttacactgaacctttcaacaacaatgtctctccagatgttgcagtaaatctaggaggagataactctcttagcaagccaa
ctagtctagatgaattaacagcagttactgttcctcaatcagaagtcacatggctagactcaaggcctattgtagatggg
aaactatctacatggtgcccttattgtaaaataaaaaagccattcagatctggtcattgtaatatatgaaccttctcagt
taaggtccaaaattccttcacatggcgggaaaactttgaaataattatggatgcatgtgaggagtacgccatacgccgaa
acaaacaacacgtaccatatcctctccgtttattaatgagaacaataattgccgtggaaattccttttccgatacatatc
aataacgttctctgcaactga

Protein
Protein IDpfu_aug1.0_9350.1_53342.t1
Definition-
>pfu_aug1.0_9350.1_53342.t1
MSEEALCCCEFEDEKGERSHILACCCNCEAVDQACDSFITCKGIPDEIAWRIIKTFDDRCRIPGFLGGGAKKLPIGSTVP
VIAIPLCLTIGTIGPIFTCLVLLSMPICMLYFYGLWRRNSTRPRTQFFFAWGVVSVLMIAVCFELLVMPKAENIFFQNIF
LLGGLFAMFYYLRKARKRISEIYSPQFYTEPFNNNVSPDVAVNLGGDNSLSKPTSLDELTAVTVPQSEVTWLDSRPIVDG
KLSTWCPYCKIKKPFRSGHCNIXTFSVKVQNSFTWRENFEIIMDACEEYAIRRNKQHVPYPLRLLMRTIIAVEIPFPIHI
NNVLCN

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