Gene
| Gene Model ID | pfu_aug1.0_9366.1_60582 |
|---|---|
| Locus | scaffold9366.1 : 10976 ... 17738 : + |
| To GenomeBrowser | scaffold9366.1:10976..17738 |
| Genes list of scaffold | scaffold9366.1 |
| Synonym | pfu_aug2.0_357.1_23921 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9366.1_60582.t1 | 2 | 1 | Ank_2 | 33 | 96 | 8.4e-19 | 67.7 | 2.8e-10 | 8.2e-07 | 29.2 |
| pfu_aug1.0_9366.1_60582.t1 | 2 | 2 | Ank_2 | 43 | 118 | 8.4e-19 | 67.7 | 2.0e-14 | 5.9e-11 | 42.5 |
| pfu_aug1.0_9366.1_60582.t1 | 2 | 1 | Ank_4 | 43 | 94 | 7.5e-09 | 35.8 | 5.8e-07 | 0.0017 | 18.7 |
| pfu_aug1.0_9366.1_60582.t1 | 3 | 1 | Ank | 45 | 60 | 5.3e-06 | 25.9 | 0.045 | 130.0 | 2.6 |
| pfu_aug1.0_9366.1_60582.t1 | 2 | 1 | Ank_5 | 46 | 63 | 6.6e-08 | 32.5 | 0.015 | 45.0 | 4.4 |
| pfu_aug1.0_9366.1_60582.t1 | 2 | 2 | Ank_5 | 67 | 116 | 6.6e-08 | 32.5 | 1.7e-09 | 5.0e-06 | 26.5 |
| pfu_aug1.0_9366.1_60582.t1 | 3 | 2 | Ank | 75 | 107 | 5.3e-06 | 25.9 | 1.6e-05 | 0.048 | 13.4 |
| pfu_aug1.0_9366.1_60582.t1 | 2 | 2 | Ank_4 | 79 | 118 | 7.5e-09 | 35.8 | 1.0e-07 | 0.0003 | 21.1 |
| pfu_aug1.0_9366.1_60582.t1 | 3 | 3 | Ank | 109 | 118 | 5.3e-06 | 25.9 | 0.0046 | 14.0 | 5.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9366.1_60582.t1 | gi|260807351|ref|XP_002598472.1| | hypothetical protein BRAFLDRAFT_127790 [Branchiostoma floridae] | 1.0e-12 |
Transcript
| Transcript ID | pfu_aug1.0_9366.1_60582.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9366.1_60582.t1 atgttgaacagaatgatctttcttattaggatcttatatcagacgtctggttgtgatcttataatagtgtcaaacgagta cgagacagggatgaacactattgaccttttctgtgacgactatacattactggaggcgtgtatagagggagacatagaag ctgtacagaacatactggacgacaatcctaccacagacgaacttaacgagagggatccaagtggaaagacaggactgagt cacgcatgcgtagcaggaaacgagcccatcgtggagatgttgtcagaaatgcagaattgtgatgtcaatatcggtgataa agagggaaacacgccgctcatttttgcagctcaagcag |
|
Protein
| Protein ID | pfu_aug1.0_9366.1_60582.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9366.1_60582.t1 MLNRMIFLIRILYQTSGCDLIIVSNEYETGMNTIDLFCDDYTLLEACIEGDIEAVQNILDDNPTTDELNERDPSGKTGLS HACVAGNEPIVEMLSEMQNCDVNIGDKEGNTPLIFAAQA |
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