Gene
Gene Model ID | pfu_aug1.0_938.1_58310 |
---|---|
Locus | scaffold938.1 : 52919 ... 63175 : - |
To GenomeBrowser | scaffold938.1:52919..63175 |
Genes list of scaffold | scaffold938.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_938.1_58310.t1 | 1 | 1 | Cyclin_N | 55 | 154 | 1.8e-18 | 66.3 | 2.0e-22 | 3.0e-18 | 65.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_938.1_58310.t1 | gi|50754762|ref|XP_414493.1| | PREDICTED: cyclin-G1 isoformX2 [Gallus gallus] | 1.0e-18 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-4cell | 1 |
8-16cell | 1 |
egg-Dshape | 1 |
trochophore | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_938.1_58310.t1 |
---|---|
Definition | - |
>pfu_aug1.0_938.1_58310.t1 atggttcaagagggtgcacctgtactctgttccaagccaaatgcatggatggaaatgacgacagagcaaagggcattggt aaagaaactacagcgggcactgaaacggcaaaatatagatgtacatacacagaatacagctgtaaaggttagagaacaat gttccctgagggactcagctgtgtcaacaataagatgccttaatcttttctacggatttggaacagagaattttgccact gctgtcagttatattgatagatttttgtccagagtaaaggtgcacccaaagtactattcctgtttggcatcagcctgttt tttccttgctgctaaattccatcaagaatctgaggatattcccagtattgatgagttggtcacattacaaagacagactt ggaaatcatcagacttgaaaagaatggaattagttgtactggagaagctatcctggaacctatggacagtaacatgccca gagatagccagaatatgctgtgatattatttcctctttttgcccaaaccaaacagcaccaaaactgcttgatattctaca aaaatatgaagtctgcgtcaattacagttgttgtgcaatatactctattgctaaaagtctttcaattccgattgtcgact tcagtttttcacaatcgattgtcactgaaaggaagatggttaagtttgaagcatttcttttccccattttcaaacgttac aattacgtgcgttttgagtatatgatgataattaaagcatgtgaataa |
Protein
Protein ID | pfu_aug1.0_938.1_58310.t1 |
---|---|
Definition | - |
>pfu_aug1.0_938.1_58310.t1 MVQEGAPVLCSKPNAWMEMTTEQRALVKKLQRALKRQNIDVHTQNTAVKVREQCSLRDSAVSTIRCLNLFYGFGTENFAT AVSYIDRFLSRVKVHPKYYSCLASACFFLAAKFHQESEDIPSIDELVTLQRQTWKSSDLKRMELVVLEKLSWNLWTVTCP EIARICCDIISSFCPNQTAPKLLDILQKYEVCVNYSCCAIYSIAKSLSIPIVDFSFSQSIVTERKMVKFEAFLFPIFKRY NYVRFEYMMIIKACE |