Gene
| Gene Model ID | pfu_aug1.0_938.1_58310 |
|---|---|
| Locus | scaffold938.1 : 52919 ... 63175 : - |
| To GenomeBrowser | scaffold938.1:52919..63175 |
| Genes list of scaffold | scaffold938.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_938.1_58310.t1 | 1 | 1 | Cyclin_N | 55 | 154 | 1.8e-18 | 66.3 | 2.0e-22 | 3.0e-18 | 65.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_938.1_58310.t1 | gi|50754762|ref|XP_414493.1| | PREDICTED: cyclin-G1 isoformX2 [Gallus gallus] | 1.0e-18 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_938.1_58310.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_938.1_58310.t1 atggttcaagagggtgcacctgtactctgttccaagccaaatgcatggatggaaatgacgacagagcaaagggcattggt aaagaaactacagcgggcactgaaacggcaaaatatagatgtacatacacagaatacagctgtaaaggttagagaacaat gttccctgagggactcagctgtgtcaacaataagatgccttaatcttttctacggatttggaacagagaattttgccact gctgtcagttatattgatagatttttgtccagagtaaaggtgcacccaaagtactattcctgtttggcatcagcctgttt tttccttgctgctaaattccatcaagaatctgaggatattcccagtattgatgagttggtcacattacaaagacagactt ggaaatcatcagacttgaaaagaatggaattagttgtactggagaagctatcctggaacctatggacagtaacatgccca gagatagccagaatatgctgtgatattatttcctctttttgcccaaaccaaacagcaccaaaactgcttgatattctaca aaaatatgaagtctgcgtcaattacagttgttgtgcaatatactctattgctaaaagtctttcaattccgattgtcgact tcagtttttcacaatcgattgtcactgaaaggaagatggttaagtttgaagcatttcttttccccattttcaaacgttac aattacgtgcgttttgagtatatgatgataattaaagcatgtgaataa |
|
Protein
| Protein ID | pfu_aug1.0_938.1_58310.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_938.1_58310.t1 MVQEGAPVLCSKPNAWMEMTTEQRALVKKLQRALKRQNIDVHTQNTAVKVREQCSLRDSAVSTIRCLNLFYGFGTENFAT AVSYIDRFLSRVKVHPKYYSCLASACFFLAAKFHQESEDIPSIDELVTLQRQTWKSSDLKRMELVVLEKLSWNLWTVTCP EIARICCDIISSFCPNQTAPKLLDILQKYEVCVNYSCCAIYSIAKSLSIPIVDFSFSQSIVTERKMVKFEAFLFPIFKRY NYVRFEYMMIIKACE |
|