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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_93989.1_71423
Locus scaffold93989.1 : 1 ... 1115 : -
To GenomeBrowser scaffold93989.1:1..1115
Genes list of scaffold scaffold93989.1
Synonym pfu_aug2.0_2905.1_18968

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_93989.1_71423.t1 1 1 Histone 17 90 1.9e-25 88.7 3.3e-29 2.4e-25 88.4

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_93989.1_71423.t1 gi|196012824|ref|XP_002116274.1| conserved hypothetical protein [Trichoplax adhaerens] 0.0

Transcript
Transcript IDpfu_aug1.0_93989.1_71423.t1
Definition-
>pfu_aug1.0_93989.1_71423.t1
atgtctggaagaggtaaaggtggaaaggcaaagtctaaagccaaatcccgatcatcaagggcaggacttcaattccctgt
tggaaggatccatcgtctcttgcgcaaggggaactactcagagagagtcggagcaggtgctccggtttacctggccgctg
tattggagtatctggccgccgaggtactggaactggcgggcaatgcagcaagggataacaagaaaagcagaatcattcct
cgccatcttcagctagccattaggaatgacgaggagctgaacaaattgctgcatggagtgaccatcgcccaaggaggagt
cctaccaaacatccaagctgtcctacttccaaaaaaggcaggtagcactaagggaaaaccaagccagagccaagagtact
ag

Protein
Protein IDpfu_aug1.0_93989.1_71423.t1
Definition-
>pfu_aug1.0_93989.1_71423.t1
MSGRGKGGKAKSKAKSRSSRAGLQFPVGRIHRLLRKGNYSERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIP
RHLQLAIRNDEELNKLLHGVTIAQGGVLPNIQAVLLPKKAGSTKGKPSQSQEY

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