Gene
| Gene Model ID | pfu_aug1.0_940.1_65699 |
|---|---|
| Locus | scaffold940.1 : 11303 ... 27585 : - |
| To GenomeBrowser | scaffold940.1:11303..27585 |
| Genes list of scaffold | scaffold940.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_940.1_65699.t1 | 2 | 1 | FWWh | 143 | 204 | 2.4e-18 | 66.1 | 1.0e-07 | 0.00074 | 19.0 |
| pfu_aug1.0_940.1_65699.t1 | 2 | 2 | FWWh | 205 | 258 | 2.4e-18 | 66.1 | 9.8e-16 | 7.3e-12 | 45.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_940.1_65699.t1 | gi|291226724|ref|XP_002733341.1| | PREDICTED: protein FAM227A-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_940.1_65699.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_940.1_65699.t1 atggcgaatattaaccgtgtgggttcgcctatggatttatgtgaagagaactacaatcaaactaaagatcagcaagatga gaaacggagatttctagaaaataaacaacgtagtaaatctcaagaagtaaacagaaaaataagtaagttagaccacaagc ttcaacgttacacagagttggtggttgaaagtagggcatcacattatgaggacattgatgacagtgcttcagtggctagt gctaaaggacgtgatcgctttgaaaaaagagagaaagaaaccaaagagttaaacaaatttgcaggatacttcacaatgaa acaagcgtttctacctggtagaagtgaaagagtaaaaaatatatccaaagtcagtatgcagccaagtaaaactgtggtga aaaaggaaactggtaaaccaaagtttgtagagctgcaccagtatccagggtacgatccaagggagataacccccttacct gatgatgtacctgtcaaggatatgttacagatggcggctcaagcatgtctacagctacataaaaagcctcagtacaagcc tttctttgagagatggttttactcagaaatgtcagaagctgtatacctggactacccaactctgataagccaagccttgt atgctggatactgccactcattccccgactcctataaacagtttggagaacagttcaaagaagaattagtcattctagtc tacggatggattgcagggattagaccatcaccacgttgctggttgttgtggaatatggacaagttagaaccagctaatat caaaaccagagaagaaatgatgaatagagagaaaagcaagaagtcctcaccatcactaaattttgacttcctcgattccc tgttctccagtaatgctagtcagtacacatccaccacctctcttaaccagtccttctctaagacttctgttcaaagctac ggaaaaagataccgaaagaaaggactgacacgtaaaggaagttctcatagctctgtatcaatatcatccaaactccaggc tgcctccccaggatcatcacaggaagggactctcattgactctgtagcagactatcaaaaaaacagcagacgacagtcta atgctgccagtagccagacaagccgtcgcacatcagtggcgcaccctggtggtggggccaccaaacaacgaccagtagat gccaggaagcttatggatgccctcacaccaataagggagacaactctagaagaagatcagctgcatgcggaaatgaagag aagcgaaggcaacaagacatccacagtgtctgtggctttaactaaagcaccgaccaagtccactgataaagttgtaaggg agtcacatccggcatgtaaaggtccaaattacatcaaatcaatatttaacatgaacggccaaagtcctcttgtagcccat tacctacgacagaagaacttagactatgcctctgatgctcccacctacagagatctgatcaaggattcatatagaaaagc tagagatctggagaaacagtatgacaatttcatcgaagcaaacagaaaagagcgtttggagattgcgaagaggaataagg cccaggacaaacagcatcgtaaacttgagtcattattattgggtaatcctaaggaagtcagtcgactcagcgaccttatc atactagaacaacagaaagacgaggattccgtatcagcgggtgctgatgctgctatagagtctgccctacagtccctgac tgtatcctga |
|
Protein
| Protein ID | pfu_aug1.0_940.1_65699.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_940.1_65699.t1 MANINRVGSPMDLCEENYNQTKDQQDEKRRFLENKQRSKSQEVNRKISKLDHKLQRYTELVVESRASHYEDIDDSASVAS AKGRDRFEKREKETKELNKFAGYFTMKQAFLPGRSERVKNISKVSMQPSKTVVKKETGKPKFVELHQYPGYDPREITPLP DDVPVKDMLQMAAQACLQLHKKPQYKPFFERWFYSEMSEAVYLDYPTLISQALYAGYCHSFPDSYKQFGEQFKEELVILV YGWIAGIRPSPRCWLLWNMDKLEPANIKTREEMMNREKSKKSSPSLNFDFLDSLFSSNASQYTSTTSLNQSFSKTSVQSY GKRYRKKGLTRKGSSHSSVSISSKLQAASPGSSQEGTLIDSVADYQKNSRRQSNAASSQTSRRTSVAHPGGGATKQRPVD ARKLMDALTPIRETTLEEDQLHAEMKRSEGNKTSTVSVALTKAPTKSTDKVVRESHPACKGPNYIKSIFNMNGQSPLVAH YLRQKNLDYASDAPTYRDLIKDSYRKARDLEKQYDNFIEANRKERLEIAKRNKAQDKQHRKLESLLLGNPKEVSRLSDLI ILEQQKDEDSVSAGADAAIESALQSLTVS |
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