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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_9412.1_24560
Locus scaffold9412.1 : 16292 ... 29935 : -
To GenomeBrowser scaffold9412.1:16292..29935
Genes list of scaffold scaffold9412.1
Synonym pfu_aug2.0_1701.1_05188

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_9412.1_24560.t1 gi|194741960|ref|XP_001953477.1| GF17775 [Drosophila ananassae] 2.0e-18

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-4cell 1
8-16cell 1
egg-Dshape 1
trochophore 1
>Adult tissues
maleGonad 1
pearlSac 1

Transcript
Transcript IDpfu_aug1.0_9412.1_24560.t1
Definition-
>pfu_aug1.0_9412.1_24560.t1
atgagaagtagtgtccccatcgtaaagatattctgtgcgcacagtcaccgtaggctaggtaatcggttcacacaccgtgg
tcgagggacattaactcggaaaattcgataccgtttccgttttccgtataacgtaaaagatagagtacaaaccgagaacg
gtttgtcattcacattttgcattttgaaaatcataaaaatggcagttgacagacttcgttgttgcattaatcgccttata
aaagacataaatagactttcttttgtttgcagtgccagagcatatccaaaactacagtcactgcagtcaccatggcaaga
gccagcgccatgtgtaataggaattgatggaatagagagtcaaaccactccatcacaccccgacatagcgtctttgtttc
ctgcttttacttggtttaaagtccccaagaaaatcaggtcattagaacgaaggcttacacggaaatttggtcagagtaga
atggaaaagtatacaaagattgaaaggcgaattctgatgtgtttggagtgcggtcactggtacgaggctggcactctatg
tggaaactgttaccagaaggtcaaacgtgagacggcggaacaaatggccaaaatgggagacgatctgacctacaactcac
cgttatcagaagttgtcgttagatacgagggtgaggaggttagagaaacggaatcaggaaaatatgtagtggaaatgaag
aaagaaaaaccacagtggttctctgataaactgatgaaaaaagccagctga

Protein
Protein IDpfu_aug1.0_9412.1_24560.t1
Definition-
>pfu_aug1.0_9412.1_24560.t1
MRSSVPIVKIFCAHSHRRLGNRFTHRGRGTLTRKIRYRFRFPYNVKDRVQTENGLSFTFCILKIIKMAVDRLRCCINRLI
KDINRLSFVCSARAYPKLQSLQSPWQEPAPCVIGIDGIESQTTPSHPDIASLFPAFTWFKVPKKIRSLERRLTRKFGQSR
MEKYTKIERRILMCLECGHWYEAGTLCGNCYQKVKRETAEQMAKMGDDLTYNSPLSEVVVRYEGEEVRETESGKYVVEMK
KEKPQWFSDKLMKKAS

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