Gene
| Gene Model ID | pfu_aug1.0_9415.1_09947 |
|---|---|
| Locus | scaffold9415.1 : 515 ... 17681 : - |
| To GenomeBrowser | scaffold9415.1:515..17681 |
| Genes list of scaffold | scaffold9415.1 |
| Synonym | pfu_aug2.0_2.1_06695 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9415.1_09947.t1 | 3 | 1 | Y_phosphatase | 118 | 150 | 2.8e-19 | 69.3 | 0.01 | 150.0 | 1.5 |
| pfu_aug1.0_9415.1_09947.t1 | 3 | 2 | Y_phosphatase | 210 | 243 | 2.8e-19 | 69.3 | 2.0e-08 | 0.0003 | 20.2 |
| pfu_aug1.0_9415.1_09947.t1 | 3 | 3 | Y_phosphatase | 247 | 338 | 2.8e-19 | 69.3 | 1.2e-16 | 1.7e-12 | 47.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9415.1_09947.t1 | gi|73950066|ref|XP_865351.1| | PREDICTED: receptor-type tyrosine-protein phosphatase U isoformX3 [Canis lupus familiaris] | 3.0e-21 |
Transcript
| Transcript ID | pfu_aug1.0_9415.1_09947.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9415.1_09947.t1 cttcagaagccccagcccaagctcctgtcatagagacgaagaaagaagacaagtctatttacgccagtagaggttcatat gctctgctcatcgaggtgggttcggaatttaccgatattcagggaaccgaaagcactaatgatgtcgtacagcaggcaga gtatggtaatgtacaagtgaataagatagctgtctccgctctatcggatgtgatacagaaaaagaaagacaatgacgaat ttcagactgaatttgagggattcggcagggagaatgcatttattgcagcccaagaagaaatgttggaaatattggccaga caacaaagaaggatatggatcatgcgacgtgagtttgacaaagacaacgatatacacaaactgtgtcgtcaggactttga ctgcgaaaaaggtaaggaacagtacaagtttctgcacgaagccttattagagggactgactatgaaagactcatctgtag acaccaaagactttccagcgatgtacgacaaaatcaaacggaaaaaccctaagtctggcaaaacttttctggaggagcaa ttcgatgccatgaatacgatgataccaaatttcaaggaaggtaactttgcaacagccaagctaccagagaataggaaaaa gaaccgctactccaatattcttgcagctgataactgtcgtttctttgttacaagctctactggtagtgactacatcaatg ccatagctataccagatcctgatatttattggccaatgtcgggttcgtctacgtttggaaaaataaaagtccaacaactg gaagaagatgttactaatgaagcatacagaatactgaagctcggtgttacgaatgtcgggtcaaatgaatgtctggtagt gaagcagttccagtgcaaattttggtctgatgagaatgccgttccacgtgataccctacaaatgctgcagctgatggatg acgtcgactcttggcagagatctaacgataatcccacaatagtcgctcattgtctattcagaacaaaaagtaaacgtaaa atattaatgtga |
|
Protein
| Protein ID | pfu_aug1.0_9415.1_09947.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9415.1_09947.t1 SEAPAQAPVIETKKEDKSIYASRGSYALLIEVGSEFTDIQGTESTNDVVQQAEYGNVQVNKIAVSALSDVIQKKKDNDEF QTEFEGFGRENAFIAAQEEMLEILARQQRRIWIMRREFDKDNDIHKLCRQDFDCEKGKEQYKFLHEALLEGLTMKDSSVD TKDFPAMYDKIKRKNPKSGKTFLEEQFDAMNTMIPNFKEGNFATAKLPENRKKNRYSNILAADNCRFFVTSSTGSDYINA IAIPDPDIYWPMSGSSTFGKIKVQQLEEDVTNEAYRILKLGVTNVGSNECLVVKQFQCKFWSDENAVPRDTLQMLQLMDD VDSWQRSNDNPTIVAHCLFRTKSKRKILM |
|