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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_9425.1_46036
Locus scaffold9425.1 : 4872 ... 17676 : -
To GenomeBrowser scaffold9425.1:4872..17676
Genes list of scaffold scaffold9425.1
Synonym pfu_aug2.0_2341.1_05496

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_9425.1_46036.t1 1 1 C1q 44 167 9.2e-24 83.8 2.4e-27 1.2e-23 83.5

Transcript
Transcript IDpfu_aug1.0_9425.1_46036.t1
Definition-
>pfu_aug1.0_9425.1_46036.t1
ggtacatggtcgcagacgtctccggtaaggatgagaaagccagaacgaggctgttggcgcaggaggaaacgctggcctac
attcagggagaaatacaagcattgaaagactgtgtttccaagcgcggcgtcgcctttactgcgcaaatggatgcgcataa
gcctattttaggcgataaacaaataatcgactttgacaaagttacaacgaacgtcggaaatgcctttgataacgacactt
ctatgtttactgcaccgatggacggggtatacgtattcgaggtcgtggtcggcacgaacggtcaaagcactacggacctg
gaaatagtcaaaaatggcgctcatctaaaacgagtctatgggtccagctaccatggttgggccacttccacggggtccgt
gacgacacgcctgacttctggtgacaaggtttacgtcagacagtacacgtacaatcatgggttagtaggtcacgagctga
catcgtttagtggcttcatggtgcaacctgaatgtaactttcaataa

Protein
Protein IDpfu_aug1.0_9425.1_46036.t1
Definition-
>pfu_aug1.0_9425.1_46036.t1
YMVADVSGKDEKARTRLLAQEETLAYIQGEIQALKDCVSKRGVAFTAQMDAHKPILGDKQIIDFDKVTTNVGNAFDNDTS
MFTAPMDGVYVFEVVVGTNGQSTTDLEIVKNGAHLKRVYGSSYHGWATSTGSVTTRLTSGDKVYVRQYTYNHGLVGHELT
SFSGFMVQPECNFQ

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