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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_9441.1_02752
Locus scaffold9441.1 : 6574 ... 10084 : +
To GenomeBrowser scaffold9441.1:6574..10084
Genes list of scaffold scaffold9441.1
Synonym pfu_aug2.0_694.1_14475

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_9441.1_02752.t1 1 1 CAP 32 122 1.2e-10 41.9 1.0e-14 1.5e-10 41.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_9441.1_02752.t1 gi|195972733|dbj|BAG68487.1| HrUrabin-Long [Halocynthia roretzi] 1.0e-15

Transcript
Transcript IDpfu_aug1.0_9441.1_02752.t1
Definition-
>pfu_aug1.0_9441.1_02752.t1
atgctgtccgtctgtttgtgtgtgattggtttgtcctactggacggcagcagagcatgtgacggtgactcctgaatacaa
gaagctcttcattgatacacataacaaaatccgccgagaagtaggctcctctaacatgcagtacctggaatgggacgata
atttggcggcggaagcagcggactgggctagtaggtgtcacttctaccacaagaacggacaaggagagaacttggcatat
aacacaaacaaaatgacggaggtggaactcatcaaagatgccatgaacatgtggtatgaagaaaagaacgactacagcta
taacagcctgtcttgtagcggaatatgcagtcattatacaaatgtgagtcttcatagagtccgctcaacatag

Protein
Protein IDpfu_aug1.0_9441.1_02752.t1
Definition-
>pfu_aug1.0_9441.1_02752.t1
MLSVCLCVIGLSYWTAAEHVTVTPEYKKLFIDTHNKIRREVGSSNMQYLEWDDNLAAEAADWASRCHFYHKNGQGENLAY
NTNKMTEVELIKDAMNMWYEEKNDYSYNSLSCSGICSHYTNVSLHRVRST

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