Gene
| Gene Model ID | pfu_aug1.0_9448.1_02754 |
|---|---|
| Locus | scaffold9448.1 : 18356 ... 25222 : + |
| To GenomeBrowser | scaffold9448.1:18356..25222 |
| Genes list of scaffold | scaffold9448.1 |
| Synonym | pfu_aug2.0_1683.1_11801 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9448.1_02754.t1 | 2 | 1 | AMP-binding | 57 | 119 | 3.0e-28 | 98.3 | 3.3e-18 | 4.9e-14 | 51.5 |
| pfu_aug1.0_9448.1_02754.t1 | 2 | 2 | AMP-binding | 167 | 243 | 3.0e-28 | 98.3 | 2.9e-16 | 4.3e-12 | 45.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9448.1_02754.t1 | gi|327263325|ref|XP_003216470.1| | PREDICTED: long-chain fatty acid transport protein 6 isoform X1 [Anolis carolinensis] | 2.0e-30 |
Transcript
| Transcript ID | pfu_aug1.0_9448.1_02754.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9448.1_02754.t1 atgctgccagttttagccactgcactcggtgcagcaggagttacctaccttggtgccaagtactttacaccatgggtgtt cgaagatttcaaaatgataaagaaattcaaattttccctcgaccagtactacaaatgtgccaaggagaataggttcctta ttgacatctttgaatctatggtattgaagcatccagacaaagtgattttacgatacgaagatgaatcgtacactttccgt caaattaacgacagagctaaccagtgcgcccatgctttcttgtctcagggagttaagccgggggatgtgttggcgataat gatgcaaaatgaaccgcagttcgtttggacataccttgatccagaacttgaaaatgcagtgatggagatccaagatgaga taggaaatgtgaagatctacacgtatacctctacgcaaaccattccaaaaagtacacccctggttcctatactggagaaa tcggaattgtcgcctgtggaaatatcttacagatctggaattaagctgactgatgccagtgtattcattttcacatctgg aaccactgggttacccaaagctgccatagtgacccatgataaagccatcaagggctgctttgccatgtggtcatgtaatt tgactagcgaggacgtcttgtatgagccactgccaatgtaccattctgccgctgctttaattggcgttggaaatatgatc actttaggtgagatttag |
|
Protein
| Protein ID | pfu_aug1.0_9448.1_02754.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9448.1_02754.t1 MLPVLATALGAAGVTYLGAKYFTPWVFEDFKMIKKFKFSLDQYYKCAKENRFLIDIFESMVLKHPDKVILRYEDESYTFR QINDRANQCAHAFLSQGVKPGDVLAIMMQNEPQFVWTYLDPELENAVMEIQDEIGNVKIYTYTSTQTIPKSTPLVPILEK SELSPVEISYRSGIKLTDASVFIFTSGTTGLPKAAIVTHDKAIKGCFAMWSCNLTSEDVLYEPLPMYHSAAALIGVGNMI TLGEI |
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