Gene
| Gene Model ID | pfu_aug1.0_9463.1_17486 |
|---|---|
| Locus | scaffold9463.1 : 36206 ... 50726 : + |
| To GenomeBrowser | scaffold9463.1:36206..50726 |
| Genes list of scaffold | scaffold9463.1 |
| Synonym | pfu_aug2.0_3.1_10038 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9463.1_17486.t1 | 1 | 1 | DPPIV_N | 157 | 292 | 4.1e-15 | 55.2 | 3.8e-18 | 7.1e-15 | 54.4 |
| pfu_aug1.0_9463.1_17486.t1 | 1 | 1 | Peptidase_S9 | 388 | 554 | 1.26117e-44 | 152.0 | 0.0 | 2.38221e-44 | 151.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9463.1_17486.t1 | gi|260820329|ref|XP_002605487.1| | hypothetical protein BRAFLDRAFT_92908 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_9463.1_17486.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9463.1_17486.t1 atggctactgacatgtcactagaacagtgtgagattacttcatccaccgatgtgtcggccatcacaaaacctccgaccac cttgtcttggggaggccttcatcaaggtgtggtggagaaacataaatttttaacagccctagccagccatgtaccaaaca atttcacatttaggacaatccatacacctgatggggcattgaccaggttgtactttttgggcataccacagaaaagtaga gagaatactttgttgtatgttgacattccaaagtatgaccccgcaagggaggccacacccattcttaactggcgtacact ctttgaagcttttcaacctacgacgtcatcagcacagctctccaaggaggaacagctactgagggagagaaaacgtcttg gtatatttggtatcacctcgtacgatattgtggagaatgaaggcaaatttatcttccctgcttgtaacaatattgtgtat gctcagctgatgaacagacaacagacacggctgtccctggtcttgattcctgtcgagtgttttatacctatatcagagag taacgatactgaaatggacattgatccgtacagtaagagttacctacccctgactgtgatttatgaagacaagtcagatg tatggataaatacacatgatattctgcactttcttcctcatgataatgattcacaagtgaagtttgtgtgggctagtgag aagactggatttagacatttgtatagtgtaacgtcaaagctacaaaactgtgatactgcctttagtgccatggatctgat agaacaatatgaaggagattatgcatcgactgtgatagaggagctgcccctgactagtggagagtgggaagttaatggga aacaggattttaccatgtttgttagtgtgtacagtcggacagaccagactcccactagtgtagtatatgatttaaaccgt agtccggatggggtgatatcaacaaactccagaggcactctactaccatctataccaaagtcaacattagactaccatgc tcctgagctgtatagcttccgcagcaagtgtggttttgatgtacacacaatgctgttcaagccccataactatgagccgg gcattaagtatcccacggtgcttatggtgtacggaggacctcaaggtactgttgagatagcagatcaagtggagggttta cagtggctgtcagactatactgatatgatagatatggatagagtggctatacatggctggtcatatggtggatacctgtc tctactaggtctggcacagagacctgatgtgttcaagattgctatggcaggtgctcccgtagtgaattggaagctgtacg acacaggttatacagagaggtatatggatgtaccagagaagaatccagaggggtacgagaatggatctgtcctcagttgt gtggaaaaattcccagacgaagaaaatcgcttgcttataatccatggtctaatagacgagaatgtccattttcatcatac cagttcactaattaatgctctagtcaaagcctgtaaaccttacagattacagatttatcctaatgagagacatggcatta ggagtcccgaatccagtgagcattacaagaccatgattctcagtttcctacagcacaatctataa |
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Protein
| Protein ID | pfu_aug1.0_9463.1_17486.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9463.1_17486.t1 MATDMSLEQCEITSSTDVSAITKPPTTLSWGGLHQGVVEKHKFLTALASHVPNNFTFRTIHTPDGALTRLYFLGIPQKSR ENTLLYVDIPKYDPAREATPILNWRTLFEAFQPTTSSAQLSKEEQLLRERKRLGIFGITSYDIVENEGKFIFPACNNIVY AQLMNRQQTRLSLVLIPVECFIPISESNDTEMDIDPYSKSYLPLTVIYEDKSDVWINTHDILHFLPHDNDSQVKFVWASE KTGFRHLYSVTSKLQNCDTAFSAMDLIEQYEGDYASTVIEELPLTSGEWEVNGKQDFTMFVSVYSRTDQTPTSVVYDLNR SPDGVISTNSRGTLLPSIPKSTLDYHAPELYSFRSKCGFDVHTMLFKPHNYEPGIKYPTVLMVYGGPQGTVEIADQVEGL QWLSDYTDMIDMDRVAIHGWSYGGYLSLLGLAQRPDVFKIAMAGAPVVNWKLYDTGYTERYMDVPEKNPEGYENGSVLSC VEKFPDEENRLLIIHGLIDENVHFHHTSSLINALVKACKPYRLQIYPNERHGIRSPESSEHYKTMILSFLQHNL |
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