Gene
| Gene Model ID | pfu_aug1.0_9463.1_17487 |
|---|---|
| Locus | scaffold9463.1 : 63024 ... 72515 : - |
| To GenomeBrowser | scaffold9463.1:63024..72515 |
| Genes list of scaffold | scaffold9463.1 |
| Synonym | pfu_aug2.0_3.1_10037 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9463.1_17487.t1 | 2 | 1 | His_Phos_2 | 5 | 40 | 9.8e-09 | 34.9 | 1.2e-08 | 9.1e-05 | 21.9 |
| pfu_aug1.0_9463.1_17487.t1 | 2 | 2 | His_Phos_2 | 61 | 87 | 9.8e-09 | 34.9 | 1.0e-05 | 0.074 | 12.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9463.1_17487.t1 | gi|149023092|gb|EDL79986.1| | similar to KIAA0377-like protein (predicted), isoform CRA_b [Rattus norvegicus] | 7.0e-25 |
Transcript
| Transcript ID | pfu_aug1.0_9463.1_17487.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9463.1_17487.t1 atgaaagatggccgttttgacatcagtaagatccccgacatctatgactgtatcaagtacgatctacagcataatcagaa aatcttacagtattctagtgctcaggacttgtttaactgttccaaggccctggctgatatcgtcattccacaggagaaca gtgaggaacaatggaaaaaggccatggactacataaatgccacaccagaacttaattatatgacccagataattatcatg atgtttgaagaccctacaaaggagataggcaaggatctttcctcgtatctccatgagcacggctttgaccctaacgcccc attaaaacgtctccatgagaggcctgtgtcggcccccatgatcatacaggagcaggaggagattgacgaggcagaaatgt ttgaacatatctccaggtttcctcatgatatagctgaagaggaaagtgaggacatcaaggaggagtcccctcctcctgaa agcagcagttgtgatctaccaccagggaagtctgtgtctgagcctatagagatcaaatctacaggcgtagaggtgccaag gaagcccgatggtaggtga |
|
Protein
| Protein ID | pfu_aug1.0_9463.1_17487.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9463.1_17487.t1 MKDGRFDISKIPDIYDCIKYDLQHNQKILQYSSAQDLFNCSKALADIVIPQENSEEQWKKAMDYINATPELNYMTQIIIM MFEDPTKEIGKDLSSYLHEHGFDPNAPLKRLHERPVSAPMIIQEQEEIDEAEMFEHISRFPHDIAEEESEDIKEESPPPE SSSCDLPPGKSVSEPIEIKSTGVEVPRKPDGR |
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