Gene
| Gene Model ID | pfu_aug1.0_9498.1_02758 |
|---|---|
| Locus | scaffold9498.1 : 20387 ... 30840 : - |
| To GenomeBrowser | scaffold9498.1:20387..30840 |
| Genes list of scaffold | scaffold9498.1 |
| Synonym | NA |
Manual annotation
| Study field | signal molecules |
|---|---|
| Gene name | deltex 3-like |
| Description | NCBI BLASTP hit to PREDICTED: deltex 3-like [Saccoglossus kowalevskii]. Orthology is supported by NJ tree. |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9498.1_02758.t1 | 1 | 1 | Macro | 309 | 419 | 3.2e-27 | 94.7 | 3.3e-30 | 3.2e-27 | 94.7 |
| pfu_aug1.0_9498.1_02758.t1 | 1 | 1 | zf-Nse | 535 | 580 | 8.8e-06 | 25.1 | 8.9e-09 | 8.8e-06 | 25.1 |
| pfu_aug1.0_9498.1_02758.t1 | 1 | 1 | zf-rbx1 | 537 | 580 | 1.0e-06 | 28.7 | 1.3e-09 | 1.3e-06 | 28.4 |
| pfu_aug1.0_9498.1_02758.t1 | 1 | 1 | zf-C3HC4_3 | 538 | 582 | 6.4e-09 | 35.3 | 1.3e-11 | 1.3e-08 | 34.3 |
| pfu_aug1.0_9498.1_02758.t1 | 1 | 1 | zf-RING_2 | 540 | 579 | 5.8e-11 | 42.0 | 1.3e-13 | 1.3e-10 | 40.8 |
| pfu_aug1.0_9498.1_02758.t1 | 1 | 1 | zf-RING_5 | 540 | 581 | 3.2e-07 | 29.9 | 3.3e-10 | 3.2e-07 | 29.9 |
| pfu_aug1.0_9498.1_02758.t1 | 1 | 1 | zf-C3HC4_2 | 541 | 579 | 5.6e-11 | 42.2 | 1.2e-13 | 1.2e-10 | 41.2 |
| pfu_aug1.0_9498.1_02758.t1 | 1 | 1 | zf-C3HC4 | 541 | 579 | 4.4e-09 | 35.8 | 4.5e-12 | 4.4e-09 | 35.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9498.1_02758.t1 | gi|291225793|ref|XP_002732882.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_9498.1_02758.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9498.1_02758.t1 aaacatcgtttcgataagctgtctacaaaattacttgaagatttgtttgcagaagagcttcattacataaatgaaaaaaa agaaaatgtaagtcttgttccaaacaatggtgctgtacttctcagggctgcaaatcctgctcttctggcaacctacaaac gatttttggatgcaaaggtcgcaaaagttgtgagtgaatgtaaagatatttcgttagcagtacaaagcaaagaggaatat gatgaggttgaaaagtttttgaagaaaaacatttcgatgttcgaaagaagaataacttacaaaaccggagaaggtgggac agcaaagacatttcgtttttacagtgaagacaggaaccaggcaatcgaatgccgcgataacattgaaagaactgtattac aacgtaacatagatgtgcttagaccaaactcaggtaaagcgaatgttgatgaagcaggaaattccagacctagtgcccaa aataagagtggaagcaaacgtccaaaatcaagcacaaaaagtaaatcctcatcagtccaggtacgacaaagttcagtcga ctccaatatgcacgcggctgtgaagcccaaggcaaagtcagttatgataccaaacaaagggtctgtcggagaaactcctt atagtctgccactacataaggtagttagagctgtatcatttgagaaagtatcatctcgtgataagagtggactcgagagt gaaaaacgccatagtgattatgttagcgtcggcgctggtgcatcaaatacacatgagttccatctagatgcaaacgcaca aggtggttcgagtggatcaccaggtgcacaaaatccacagacatatagcaagagtgtaattgttaatggacttacagtac gattcatgcttattccattgacaaaaatatctgtagacgctatagtaaatgcagccaataaaaatctttcaaacggggct ggtgttgctttggccattgcaaaggaagctggaaagcagtatcagagggagtgtgatgatctagttaagaagaatggaaa aattgcagtgtccaaaaatgttgtaacaaaatcacacaagctgcagaagacttgtaaacatgtcataaatgctgtcggtc cagactgggctgactatacagacaaagaagatgctctgaaagacctagctctgacagtggagaatgtattggagactgct gcgacaatgaatatgacctctgttgctatgcctcctatttcttcaggtcacattagagatcagtggctcctaacagctat tggaggtgctgtatttgatggcatatatcgttattccaaatctgccaaaacgagtgtaaagaaaatccacttggtcaaca taaatgaggaaacaaccagtgccatccgcaagattttcttgagtgaggcaactggtcagcttaatcaagaagacgaagaa agagtgactgaaatggaggaacgaagaagacctcatgtggacaatcccaaagaagcacttgctcctttggatgtttggaa aacaaatacaaaagacaaagcagctgttgacttagaatcctgcatcatagaaaaagggaacctagctattattgacgatg acgatgaatcagataatagttgtgtggtatgcatggaacctatggaccaaccagtagcactacgaaattgtgggcatcag ttttgtcgagactgtatcttggattatttttccaggaaaccgtcttgtcccatgtgtaacacgatgtacggaaagcttta tggtgatcagcctgttgatgctacggctaatgtttacttggacaaatcatcacttcctggacatgaaggacatgggacgt ttatcatagattatgatattcctgatggaaggcagaatgatcaacatccgaatccgggtatgtcttatcgtggatttcga agacgggcttacctccctgacacagaagaaggtcaaacggttcttcatcttctaagagaagcatttaatcaaggccttat atttactatcggatactcgcggaccacggggaaggacaacgtgctgacatggaatgatatccaccataaaacgcggaaag aaggcggaccacagaggtag |
|
Protein
| Protein ID | pfu_aug1.0_9498.1_02758.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9498.1_02758.t1 KHRFDKLSTKLLEDLFAEELHYINEKKENVSLVPNNGAVLLRAANPALLATYKRFLDAKVAKVVSECKDISLAVQSKEEY DEVEKFLKKNISMFERRITYKTGEGGTAKTFRFYSEDRNQAIECRDNIERTVLQRNIDVLRPNSGKANVDEAGNSRPSAQ NKSGSKRPKSSTKSKSSSVQVRQSSVDSNMHAAVKPKAKSVMIPNKGSVGETPYSLPLHKVVRAVSFEKVSSRDKSGLES EKRHSDYVSVGAGASNTHEFHLDANAQGGSSGSPGAQNPQTYSKSVIVNGLTVRFMLIPLTKISVDAIVNAANKNLSNGA GVALAIAKEAGKQYQRECDDLVKKNGKIAVSKNVVTKSHKLQKTCKHVINAVGPDWADYTDKEDALKDLALTVENVLETA ATMNMTSVAMPPISSGHIRDQWLLTAIGGAVFDGIYRYSKSAKTSVKKIHLVNINEETTSAIRKIFLSEATGQLNQEDEE RVTEMEERRRPHVDNPKEALAPLDVWKTNTKDKAAVDLESCIIEKGNLAIIDDDDESDNSCVVCMEPMDQPVALRNCGHQ FCRDCILDYFSRKPSCPMCNTMYGKLYGDQPVDATANVYLDKSSLPGHEGHGTFIIDYDIPDGRQNDQHPNPGMSYRGFR RRAYLPDTEEGQTVLHLLREAFNQGLIFTIGYSRTTGKDNVLTWNDIHHKTRKEGGPQR |
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