Gene
| Gene Model ID | pfu_aug1.0_9502.1_60612 |
|---|---|
| Locus | scaffold9502.1 : 23666 ... 26400 : + |
| To GenomeBrowser | scaffold9502.1:23666..26400 |
| Genes list of scaffold | scaffold9502.1 |
| Synonym | pfu_aug2.0_242.1_07213 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9502.1_60612.t1 | 1 | 1 | Glyco_transf_49 | 34 | 284 | 1.2e-40 | 139.5 | 1.09301e-43 | 5.5e-40 | 137.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9502.1_60612.t1 | gi|348520260|ref|XP_003447646.1| | PREDICTED: N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase-like [Oreochromis niloticus] | 1.0e-24 |
Transcript
| Transcript ID | pfu_aug1.0_9502.1_60612.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9502.1_60612.t1 atgacaacagcgagctgcgctgacagggaagaatattatataatcagggatgtttttaaaactttcaaaatgcgtaaaat ttttggcggaagtgacatcatcacaattattacacaaacgacgccaaatcatatcgaggctttggaccttctgttacagc gctggagcggtcctgtttccgtggcaatatttctatgcgtaaaagatatcgcagccgttctgagttccctgtttagatat ggggatatgactgtatccttccatttcgtagcgatagattggaatcacgaaaattcgtctgtgtgtgaaatgatgatgac atctaacactggatttatcaatccgcgagacaaaagagtgcgctatccctacaacgttttgagaaatgtggcactgtcct ctgtacgaaacggatacgttttcatgacggacattgacttagttccctcagttaacctccatgatgattttctcagtcat gttgcatctatatcaaacgacaataaagttactgataattataattctcctgaagtttatatgttgaagttcagaactgc ttacgtcataccgtctttcgagtcattcaacaaatattattatgcggatgataaaaatgaaataattgcatatgttcaaa aagggttggtaagacagtatgcatacgaatcttgtaaacattgtcagaacaacaccaattataagagatggttgtcaaac cctttacatggagactacgaaataccgatgagtgtttaccgctacgagcctttcttcatcttgcaccacagtagctatcc aagtttcgatgaacggttcaaggacaggggccttaacagactcgcacaggtataa |
|
Protein
| Protein ID | pfu_aug1.0_9502.1_60612.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9502.1_60612.t1 MTTASCADREEYYIIRDVFKTFKMRKIFGGSDIITIITQTTPNHIEALDLLLQRWSGPVSVAIFLCVKDIAAVLSSLFRY GDMTVSFHFVAIDWNHENSSVCEMMMTSNTGFINPRDKRVRYPYNVLRNVALSSVRNGYVFMTDIDLVPSVNLHDDFLSH VASISNDNKVTDNYNSPEVYMLKFRTAYVIPSFESFNKYYYADDKNEIIAYVQKGLVRQYAYESCKHCQNNTNYKRWLSN PLHGDYEIPMSVYRYEPFFILHHSSYPSFDERFKDRGLNRLAQV |
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