Gene
| Gene Model ID | pfu_aug1.0_9502.1_60613 |
|---|---|
| Locus | scaffold9502.1 : 27136 ... 31448 : + |
| To GenomeBrowser | scaffold9502.1:27136..31448 |
| Genes list of scaffold | scaffold9502.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9502.1_60613.t1 | 1 | 1 | Glyco_transf_49 | 14 | 233 | 2.2e-40 | 138.7 | 5.88545e-44 | 2.9e-40 | 138.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9502.1_60613.t1 | gi|156367099|ref|XP_001627257.1| | predicted protein [Nematostella vectensis] | 3.0e-31 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_9502.1_60613.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9502.1_60613.t1 atgatgactacaaaaaccgactttatcaaccagagagacgtgggggtttcatatccttataacgtgttgaggaatgtagc tctttccgccgtgaaatcgggatatattttcatgatagatatcgacatgttgacctctgtgaatctccatgataattttc tgagtcatataggaactatatcaaataacacaaaaatgactagtaataattcattttctattacccgggcagagtacatg atgaaatttaggacagcttatgtcattccatctttcgagtctcaaagtcctttatatgatgtcaaacataagtacgagtt gcttcccttagtaggagaaggattcgtcagaccatatgcttctgcatcgtgcaaacattgtcagaagaatacaaactata aaaaatggctctcagattcggaacacggtgcctacgatatacctatgagcccctaccattacgaaccattcttcatcctt cacaaaagtagttatccaagttttaacgaattgttcaaggacaggggtcttaacagagtatcacaggtatgtgaaacgta catgtctggtgtcaatttccgtgtattgaacagtgggtttttacttcatcgaggattccgaccgagaaggataaaagatt atgagaagaaaaactatctgatctacaacaacatgaagaaaacattaaaactgaagtacgatacgagcagggaatgtgat gtgatcgcaaattattcccgtattcaaactacaaccaccaagcccgtacttgcaaagccaaattaa |
|
Protein
| Protein ID | pfu_aug1.0_9502.1_60613.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9502.1_60613.t1 MMTTKTDFINQRDVGVSYPYNVLRNVALSAVKSGYIFMIDIDMLTSVNLHDNFLSHIGTISNNTKMTSNNSFSITRAEYM MKFRTAYVIPSFESQSPLYDVKHKYELLPLVGEGFVRPYASASCKHCQKNTNYKKWLSDSEHGAYDIPMSPYHYEPFFIL HKSSYPSFNELFKDRGLNRVSQVCETYMSGVNFRVLNSGFLLHRGFRPRRIKDYEKKNYLIYNNMKKTLKLKYDTSRECD VIANYSRIQTTTTKPVLAKPN |
|