Gene
| Gene Model ID | pfu_aug1.0_9505.1_09968 |
|---|---|
| Locus | scaffold9505.1 : 17716 ... 26218 : + |
| To GenomeBrowser | scaffold9505.1:17716..26218 |
| Genes list of scaffold | scaffold9505.1 |
| Synonym | pfu_aug2.0_2221.1_05457 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9505.1_09968.t1 | 1 | 1 | Pkinase | 39 | 297 | 0.0 | 183.8 | 0.0 | 0.0 | 183.4 |
| pfu_aug1.0_9505.1_09968.t1 | 1 | 1 | Pkinase_Tyr | 40 | 298 | 5.6e-36 | 123.9 | 3.0e-39 | 7.4e-36 | 123.5 |
| pfu_aug1.0_9505.1_09968.t1 | 1 | 1 | Kinase-like | 149 | 243 | 3.5e-09 | 36.0 | 2.1e-12 | 5.2e-09 | 35.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9505.1_09968.t1 | gi|291238394|ref|XP_002739114.1| | PREDICTED: serine/threonine-protein kinase SBK1-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_9505.1_09968.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9505.1_09968.t1 atggacgctactgtaataacgcagcaagaggatctggcaaacctcaggaacgttccaaaatcaccaaggtgcagcacatc cgagaacctgctcaacttgaatataaaagagcattatgaaatcattaaggaactagggcggggtacatacggaaaggttg tactagggagatgcaaagagacaggtacgcaggtagctttgaaggtcttgccaaaaactaacgtcaagctacgcgaattt cagagagaatttgacttgagctattttctctcgccacattccaacattgttgatacatataatgtagcttttgaaacgaa atcttccttcgtgtttgctcaagaatttgcaccagtaggggacctgtttgataaaataacccctcagcaaggaatgtcag aaaaagacgcaaagtgtgtgatcagacaaatagcgtccgcgttagacttcatgcatagcaaaaaactggtgcacagagac atcaaacccgaaaacgtcctcatctttgaccatgaattttcgaaagtgaaactaatggatttcggaatgacgcgcaaaga tggaactgtcattcggaaagtcaacggaagcattccttacacaccaccggaaatatgtgaagcggtcagaaacgaaagta tcaccgtttcgacgtcatgtgacatctgggcgtttggtgtacttcttttttgtatgttgacaggaaatttcccttgggaa aatgcggacatatcggacgtttattacaatgaattcactttatggcagagacgaaaatcaacaaaactgccctcacaatg gaaaaaattcactccaagacttatgcgattatttcgcaaaatattagacccaaaaggtgaaagacgatgcgaaatcaaag aaatttgtaaatatcttaacgactcatggatacagccgtgtaaaaatagtgataacgaggaagaggacatggcgtccgga agtgaccatatggacgaactgtctaacattctgcagaaccacggaattgagacgcacatggacaaacgtgtgcgagaact cagaatatcggaatggttactgtcattatag |
|
Protein
| Protein ID | pfu_aug1.0_9505.1_09968.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9505.1_09968.t1 MDATVITQQEDLANLRNVPKSPRCSTSENLLNLNIKEHYEIIKELGRGTYGKVVLGRCKETGTQVALKVLPKTNVKLREF QREFDLSYFLSPHSNIVDTYNVAFETKSSFVFAQEFAPVGDLFDKITPQQGMSEKDAKCVIRQIASALDFMHSKKLVHRD IKPENVLIFDHEFSKVKLMDFGMTRKDGTVIRKVNGSIPYTPPEICEAVRNESITVSTSCDIWAFGVLLFCMLTGNFPWE NADISDVYYNEFTLWQRRKSTKLPSQWKKFTPRLMRLFRKILDPKGERRCEIKEICKYLNDSWIQPCKNSDNEEEDMASG SDHMDELSNILQNHGIETHMDKRVRELRISEWLLSL |
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