Gene
| Gene Model ID | pfu_aug1.0_952.1_00558 |
|---|---|
| Locus | scaffold952.1 : 16996 ... 38489 : + |
| To GenomeBrowser | scaffold952.1:16996..38489 |
| Genes list of scaffold | scaffold952.1 |
| Synonym | pfu_aug2.0_278.1_27156 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_952.1_00558.t1 | 6 | 1 | WD40 | 328 | 345 | 3.4e-19 | 67.9 | 0.0067 | 100.0 | 3.0 |
| pfu_aug1.0_952.1_00558.t1 | 6 | 2 | WD40 | 378 | 406 | 3.4e-19 | 67.9 | 6.2e-05 | 0.92 | 9.5 |
| pfu_aug1.0_952.1_00558.t1 | 6 | 3 | WD40 | 416 | 455 | 3.4e-19 | 67.9 | 8.1e-07 | 0.012 | 15.4 |
| pfu_aug1.0_952.1_00558.t1 | 6 | 4 | WD40 | 527 | 561 | 3.4e-19 | 67.9 | 5.2e-09 | 7.7e-05 | 22.4 |
| pfu_aug1.0_952.1_00558.t1 | 6 | 5 | WD40 | 582 | 619 | 3.4e-19 | 67.9 | 4.1e-05 | 0.6 | 10.0 |
| pfu_aug1.0_952.1_00558.t1 | 6 | 6 | WD40 | 654 | 670 | 3.4e-19 | 67.9 | 0.0087 | 130.0 | 2.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_952.1_00558.t1 | gi|291225618|ref|XP_002732798.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-Dshape | 2 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 2 |
| maleGonad | 1 |
| mantle | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_952.1_00558.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_952.1_00558.t1 atgcctcccaaagctcccccaaagaagcaggggcagaccaaaggcaaagctccacgaactagccatggaaaatcaggagg aaaggatggagacgacatgacagatatgggtgacacagagggagaggattggatgcatactaagacattagtgaagccag atgaccagctagacctttcagatcaacaattaaaagaggaatttaccagaatcctgacagcaaacaatcctcatgcacca caaaatattgtcagatacagttttaaggagagacagtacaaacaaacctcccatgttgatcagttggccattcatttcac tctggatggaaacatgctccataaggattctgatgaggctaaacgacaaagagctaggctaggtttaccagaagtgacac aagaagcggcaggtagtgagggtggggagaccacgcctgcagcagcagctgccccagcagaaggggaagaaggcaaagaa gagggaaaggaaggggagcaaactgaggagacaactacccctgccccaggtggagctgaggcaggcaagaaactgaccaa tcagttcaacttcagtgagagggcctcacagacatataacaacccatacagagaaagaggtactgccactgagcctccac ccagagctacattctctgctaatgtcacacagtgggaaatatttgatgcatatcaagaggactttgagaaacaggaaaaa agcaaagaaaagaaaaccattccaggaaggaaagaagaagaaaagacaagaaagaagcttacaattacagaaactcaggg agatgatgtatcaaggatatcaaaggctgctaaaattattgagaggatggtcaatcaaaacacgtatgacgatatcgctc aagatttcaaatactgggaagatccttctgatgaatacagggaaaacgagggtaccatgctgccgttgtggaagttctcg tttgaaaaagccaagaagcttgctgtgacatcactctgctggaatccacgttacaaggatctttttgctgcttcatttgg atcgtatgacttcatgaagcaaggaaatggcatgattctgttctacactttgaagaacccctcattccccgagtacgtct atgaaacagacagcggtgtcatgtgcttagatgttcacaaagagaattcatacttagtagctgttggtttttatgacggt agtgtaggtgtttacagcatcggcaagaaagagccacttcaccgatgtacggccaagaatggcaaacacacagaccctgt atggcaggtacgatggcagaaggatgatttagagaataaccataacttctattcagtgtcatctgatggaaggatagtca actggacaattttaaagaatgaacttacatatgaagatgtcatcacactccatatgcctgatagctcaggagagggacct gacggtaccaaagttagcactataggatgtggcactgcttttgacttccacaagaagaacgactacttgttcctggtggg tacagaggagggtaaaatcaacacgtgttcaaaagcttatagcagccagttcctggattctgtagatgcacataacatgg ctgtatataaagtacgctggaaccccttccatccccgtatctatataacatgcagtgctgactggcaggtcaagatttgg gaggttagcagtcaaaccacagcagacaaaaccgagggaatatcaaatgagtcacaaacaaagaaacctctttttacctt tgatctgaacaactcagtaggtgacgtagcctgggctccttactcatccacagttttcgctgctgtaaccgctgacggaa agatctttatgtacgaccttagcatcaacaaatatgagcctctttgtgaacaaatgattgcacagaagaagaaaacgaag ctgacacatttagaattcaatcctttcgacccaattatcattataggagatgacagaggaaatgttactagtgtgaaaat ttcaccaaacttaaggaaaatgccaaaggaaaagaaaggtgcccctcccccagatcctgctgtgaaagaagccaacgaaa tcgccaaattagaaaagcttctggctatggtacgagaaccatctgatgataaaaagtaa |
|
Protein
| Protein ID | pfu_aug1.0_952.1_00558.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_952.1_00558.t1 MPPKAPPKKQGQTKGKAPRTSHGKSGGKDGDDMTDMGDTEGEDWMHTKTLVKPDDQLDLSDQQLKEEFTRILTANNPHAP QNIVRYSFKERQYKQTSHVDQLAIHFTLDGNMLHKDSDEAKRQRARLGLPEVTQEAAGSEGGETTPAAAAAPAEGEEGKE EGKEGEQTEETTTPAPGGAEAGKKLTNQFNFSERASQTYNNPYRERGTATEPPPRATFSANVTQWEIFDAYQEDFEKQEK SKEKKTIPGRKEEEKTRKKLTITETQGDDVSRISKAAKIIERMVNQNTYDDIAQDFKYWEDPSDEYRENEGTMLPLWKFS FEKAKKLAVTSLCWNPRYKDLFAASFGSYDFMKQGNGMILFYTLKNPSFPEYVYETDSGVMCLDVHKENSYLVAVGFYDG SVGVYSIGKKEPLHRCTAKNGKHTDPVWQVRWQKDDLENNHNFYSVSSDGRIVNWTILKNELTYEDVITLHMPDSSGEGP DGTKVSTIGCGTAFDFHKKNDYLFLVGTEEGKINTCSKAYSSQFLDSVDAHNMAVYKVRWNPFHPRIYITCSADWQVKIW EVSSQTTADKTEGISNESQTKKPLFTFDLNNSVGDVAWAPYSSTVFAAVTADGKIFMYDLSINKYEPLCEQMIAQKKKTK LTHLEFNPFDPIIIIGDDRGNVTSVKISPNLRKMPKEKKGAPPPDPAVKEANEIAKLEKLLAMVREPSDDKK |
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