Gene
| Gene Model ID | pfu_aug1.0_9525.1_46050 |
|---|---|
| Locus | scaffold9525.1 : 29056 ... 37030 : + |
| To GenomeBrowser | scaffold9525.1:29056..37030 |
| Genes list of scaffold | scaffold9525.1 |
| Synonym | pfu_aug2.0_1770.1_01827 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9525.1_46050.t1 | 1 | 1 | PARP_reg | 1 | 104 | 8.5e-29 | 99.9 | 2.4e-32 | 1.2e-28 | 99.4 |
| pfu_aug1.0_9525.1_46050.t1 | 4 | 1 | PARP | 70 | 97 | 2.8e-26 | 92.2 | 0.13 | 650.0 | -0.5 |
| pfu_aug1.0_9525.1_46050.t1 | 4 | 2 | PARP | 107 | 123 | 2.8e-26 | 92.2 | 0.059 | 290.0 | 0.7 |
| pfu_aug1.0_9525.1_46050.t1 | 4 | 3 | PARP | 122 | 186 | 2.8e-26 | 92.2 | 5.3e-24 | 2.6e-20 | 72.7 |
| pfu_aug1.0_9525.1_46050.t1 | 4 | 4 | PARP | 192 | 236 | 2.8e-26 | 92.2 | 1.9e-07 | 0.00095 | 18.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9525.1_46050.t1 | gi|115623662|ref|XP_785135.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_9525.1_46050.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9525.1_46050.t1 atgccactaggaaaattaagtaagacgcagattgccaaaggatttgaatgtctggaagaaatagaagaggccgttaaagc aaagaagccaaagaatacactagcggctctgtcgtctaaattctacacgttgattccacatgattttggtagaaaaatcc ctccagtgatgaatgatttagaaacagtgcgacagaaatatgacatgttattggttttgggagatattgagttggcacag tccatgcaaaaagacaaagacaaagtggccactaaaggtgacaagccacctcatccattggatgtcaactatggtctact caagtgtaagctagacttactggatggtaaatcaaaggaatttaagaaatccagattttctgcacacgatggtctaggaa ataggaaattgttatggcatggcaccaacgtggctgtagtggcagccattttgaaaagcggattgcgaattatgccacac agtggtggaagagtaggaaaaggaatctactttgcctcggaaaacagcaaatcagcaggctatgaccctaagaaagacac caaactgaagttggacggcaaagatgttgttgttccgcaaggtgcccctgtcgaccagccagcatataaccgtaaaagta gctttgaccagagtgaatatctgatctacaaagaatcacagaacattatgagatatctgttgatgattgacttttaa |
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Protein
| Protein ID | pfu_aug1.0_9525.1_46050.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9525.1_46050.t1 MPLGKLSKTQIAKGFECLEEIEEAVKAKKPKNTLAALSSKFYTLIPHDFGRKIPPVMNDLETVRQKYDMLLVLGDIELAQ SMQKDKDKVATKGDKPPHPLDVNYGLLKCKLDLLDGKSKEFKKSRFSAHDGLGNRKLLWHGTNVAVVAAILKSGLRIMPH SGGRVGKGIYFASENSKSAGYDPKKDTKLKLDGKDVVVPQGAPVDQPAYNRKSSFDQSEYLIYKESQNIMRYLLMIDF |
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