Gene
| Gene Model ID | pfu_aug1.0_953.1_07771 |
|---|---|
| Locus | scaffold953.1 : 1 ... 20062 : + |
| To GenomeBrowser | scaffold953.1:1..20062 |
| Genes list of scaffold | scaffold953.1 |
| Synonym | pfu_aug2.0_245.1_17177 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_953.1_07771.t1 | 3 | 1 | CD36 | 2 | 108 | 0.0 | 198.0 | 1.4e-27 | 1.0e-23 | 83.4 |
| pfu_aug1.0_953.1_07771.t1 | 3 | 2 | CD36 | 100 | 227 | 0.0 | 198.0 | 7.7e-38 | 5.7e-34 | 117.2 |
| pfu_aug1.0_953.1_07771.t1 | 3 | 3 | CD36 | 228 | 270 | 0.0 | 198.0 | 0.0064 | 48.0 | 2.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_953.1_07771.t1 | gi|185132286|ref|NP_001117983.1| | CD36 antigen [Oncorhynchus mykiss] | 1.0e-26 |
Transcript
| Transcript ID | pfu_aug1.0_953.1_07771.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_953.1_07771.t1 gtatctagacttctggacttcaccttgggccaacatggtcaatgggtcagatggcaccattgggcctccatatgtctcaa aatctcgggttccatatgcgtttgcctctgatatatgcaggtctgtaagtgggaaatatacagaggatgttgaatttaaa ggtgtgaacttatggcggtacggtgcagagatgtcatacttagaaaatgctacattaaatccggacaacgcaggattctg tactccacctggccagtgcttggacactggaatcattaacatcagctcatgtcaaatagatggcaccattgggcctccat atgtctctaaatctcgggttccatatgcatttgcctctgatatatgcaggtctgtaagtggaaaatataccgaggatgtt gaatttaaaggtgtaaacttgtggcgttatggtgcggagatgtcatacttagaaaacgctacgctaaacccggacaacgc aggattctgtactccccccggtcagtgcttggacactggaatcattaacatcagctcgtgccaaatagttgactttttcc acattcctgtatcgatgtcgttacctcatttctacctggggtcagacagatacattaacgctgtatacaacatgaaacct aataaagaggagcatgagactgttttagacatggaaccttctgccaagatagacgataagaacctggcgttgtttaggag catgttactgacccctctgatggttatagaggcgttagagatcgctctcatagcgggaggggcgctggtcatgttgttga cgctggcatacggcttctataaacacaagaaaggtttcgagatttttgagaagaaatcagaggaacggcgaggtctgctg tcgaacaatgagcaaacttctaagtga |
|
Protein
| Protein ID | pfu_aug1.0_953.1_07771.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_953.1_07771.t1 YLDFWTSPWANMVNGSDGTIGPPYVSKSRVPYAFASDICRSVSGKYTEDVEFKGVNLWRYGAEMSYLENATLNPDNAGFC TPPGQCLDTGIINISSCQIDGTIGPPYVSKSRVPYAFASDICRSVSGKYTEDVEFKGVNLWRYGAEMSYLENATLNPDNA GFCTPPGQCLDTGIINISSCQIVDFFHIPVSMSLPHFYLGSDRYINAVYNMKPNKEEHETVLDMEPSAKIDDKNLALFRS MLLTPLMVIEALEIALIAGGALVMLLTLAYGFYKHKKGFEIFEKKSEERRGLLSNNEQTSK |
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