Gene
| Gene Model ID | pfu_aug1.0_953.1_07773 |
|---|---|
| Locus | scaffold953.1 : 50926 ... 77417 : + |
| To GenomeBrowser | scaffold953.1:50926..77417 |
| Genes list of scaffold | scaffold953.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_953.1_07773.t1 | 4 | 1 | FH2 | 10 | 48 | 1.9e-19 | 69.8 | 0.061 | 910.0 | -1.6 |
| pfu_aug1.0_953.1_07773.t1 | 4 | 2 | FH2 | 392 | 435 | 1.9e-19 | 69.8 | 0.32 | 4700.0 | -3.9 |
| pfu_aug1.0_953.1_07773.t1 | 4 | 3 | FH2 | 570 | 680 | 1.9e-19 | 69.8 | 1.0e-18 | 1.5e-14 | 53.7 |
| pfu_aug1.0_953.1_07773.t1 | 4 | 4 | FH2 | 675 | 718 | 1.9e-19 | 69.8 | 1.8e-09 | 2.6e-05 | 23.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| adductorMuscle | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_953.1_07773.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_953.1_07773.t1 atgacgaggaagacagagaccccacccgagaccactaccacgaaccccaagtccccccagtcaccagccagacccaaggg actcccctcagcagcggcccaacagatggggaatattctgaaaaagaacaaaggatccgtaaccataggtgacatcttga acctgtgttataagccacccgactctaaggtgatcaaagtccccggggtcacttccctggcggaggatctccattttcga ggctatgggtctgtaaaggaactcttggagaatttaaacgtggatacgcaaaagcttgaggattgtgcactacaaatata cagataccacaatggtactcagggtgattatggaacgtacttagatttagaatcttcgatagatgaacagcaggaggaat tagaaggatttcaagaccaaacaaagagtgaccttgacagtgttcggaaaagtcgccgatattcccacgggagcggtcca aggggaatgggaaaatccaagagtgtcccagcattatccaaagctgaagaagaaatactccctcacgaggcttacagaca aactaaacaaaggcagaaagagaaatgtatgttggtgccagaagagtctgagctgatggaccagttgccagaccatcaaa gacggcgacagcgtctcagcgaaatgcaacaaacaaacgaggagacacgacctcccgacaagcccccagaatccccgcgt tcccctgggatgagtgctcaaggctctacggacgaggaacagtgtaggcagacatcattcatggaacgtagaaagaaagt agcagaccagaaccatcagtacttgaacaaaccacaaaaagccgaagattctatatccaaagaatccggttaccaaagca atgaagatgtttctcaatctcatactcaaaatggacttgaagtgaaacacaatgcaataaacgaatctcataatggtggt cctgccgttgaggaccctgggatgtcaagtaatactagatggctgatgtatatgaagaaaaaagaagagaaggaacacga agaagaggctcctgccccaggggtcttaaaacggcatccgtccatgtgcggggacagtcttacacagaggaaggaaaatt tgaatcagggacagttagaaaacggtttattaggtgttcgaaggactcaggtcgaagacaatgagaagaaagtgaaggaa aatttagacaagttcagtgcaaaaccgagtgttcaggaaaaagagaagcgagcccccactggggatatctcgggtcttat aggtaaagccaaagagggcttgaacaagcaacaatcatcaagtgccaaagaacctccaaaggaagtgaaaccgacgccta cctctgtgccagatataaaaactgagagtgatttacagtgggataaattactgaagcatttacatagacctttgaaaatc aaggatttagatttcactgatctcaaagatgaagaggacgctagtgtgtttgctacgccagcggtgcctgggttcggagg tggtgctggtgtaccaccgcctcctccccctatgccaggaatggcaccaccaccacctcctccaccacctggtgcaccac cccctccaccccctgcaccaggaatgggacctccccctcctccaccttttggaacacccccagcccctgctatggttgtg aaccttccccctccccctggtgcaaatttacagaagtgcaaaaagaccatcaagttacattggcgcacagtgcagccgga gacgccccatccatccaccaaaggagaaacgatctggaagaatatcattcccgttaaggtggatccagaaaaactagaac atctcttcgagactaggaccagtgaaatggcgaaaaagaataaagagaatgtagggaagaaggagataacggtgctagac cctaaacggtccaacgccatcaacatcggtctcacggtgcttcccccaccaaggaccatcaaggccggtatcctcaaaat ggacaactccatcatgaacagagagggaattgaggaaatagcagaccctctaagtgacatgaagaagggcattgatgaac tacgagggaaccatacattcaaatgtattatatctgtgatactcaccattggaaacttccttaatggttctcagatacct gcacaaatgggaagtaactctgtatttcgaaaagaccgaattacagactatacaaatatgcagtggaaatctgatgatgg tgatgattcataa |
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Protein
| Protein ID | pfu_aug1.0_953.1_07773.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_953.1_07773.t1 MTRKTETPPETTTTNPKSPQSPARPKGLPSAAAQQMGNILKKNKGSVTIGDILNLCYKPPDSKVIKVPGVTSLAEDLHFR GYGSVKELLENLNVDTQKLEDCALQIYRYHNGTQGDYGTYLDLESSIDEQQEELEGFQDQTKSDLDSVRKSRRYSHGSGP RGMGKSKSVPALSKAEEEILPHEAYRQTKQRQKEKCMLVPEESELMDQLPDHQRRRQRLSEMQQTNEETRPPDKPPESPR SPGMSAQGSTDEEQCRQTSFMERRKKVADQNHQYLNKPQKAEDSISKESGYQSNEDVSQSHTQNGLEVKHNAINESHNGG PAVEDPGMSSNTRWLMYMKKKEEKEHEEEAPAPGVLKRHPSMCGDSLTQRKENLNQGQLENGLLGVRRTQVEDNEKKVKE NLDKFSAKPSVQEKEKRAPTGDISGLIGKAKEGLNKQQSSSAKEPPKEVKPTPTSVPDIKTESDLQWDKLLKHLHRPLKI KDLDFTDLKDEEDASVFATPAVPGFGGGAGVPPPPPPMPGMAPPPPPPPPGAPPPPPPAPGMGPPPPPPFGTPPAPAMVV NLPPPPGANLQKCKKTIKLHWRTVQPETPHPSTKGETIWKNIIPVKVDPEKLEHLFETRTSEMAKKNKENVGKKEITVLD PKRSNAINIGLTVLPPPRTIKAGILKMDNSIMNREGIEEIADPLSDMKKGIDELRGNHTFKCIISVILTIGNFLNGSQIP AQMGSNSVFRKDRITDYTNMQWKSDDGDDS |
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