Gene
| Gene Model ID | pfu_aug1.0_95340.1_13514 |
|---|---|
| Locus | scaffold95340.1 : 1 ... 1503 : - |
| To GenomeBrowser | scaffold95340.1:1..1503 |
| Genes list of scaffold | scaffold95340.1 |
| Synonym | pfu_aug2.0_445.1_17434 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_95340.1_13514.t1 | 3 | 1 | TPR_1 | 7 | 25 | 3.1e-15 | 55.0 | 0.78 | 820.0 | -0.2 |
| pfu_aug1.0_95340.1_13514.t1 | 2 | 1 | TPR_11 | 7 | 62 | 4.1e-13 | 48.7 | 4.0e-07 | 0.00042 | 19.8 |
| pfu_aug1.0_95340.1_13514.t1 | 2 | 1 | TPR_17 | 21 | 53 | 7.0e-10 | 38.3 | 1.3e-07 | 0.00014 | 21.7 |
| pfu_aug1.0_95340.1_13514.t1 | 2 | 1 | TPR_12 | 27 | 63 | 6.8e-08 | 32.3 | 6.3e-05 | 0.067 | 13.1 |
| pfu_aug1.0_95340.1_13514.t1 | 2 | 2 | TPR_11 | 31 | 94 | 4.1e-13 | 48.7 | 1.6e-11 | 1.7e-08 | 34.0 |
| pfu_aug1.0_95340.1_13514.t1 | 3 | 2 | TPR_1 | 32 | 64 | 3.1e-15 | 55.0 | 3.8e-10 | 4.0e-07 | 29.3 |
| pfu_aug1.0_95340.1_13514.t1 | 2 | 2 | TPR_12 | 32 | 93 | 6.8e-08 | 32.3 | 3.0e-08 | 3.1e-05 | 23.8 |
| pfu_aug1.0_95340.1_13514.t1 | 2 | 1 | TPR_2 | 32 | 62 | 6.7e-06 | 25.6 | 0.0051 | 5.4 | 7.1 |
| pfu_aug1.0_95340.1_13514.t1 | 2 | 2 | TPR_17 | 58 | 86 | 7.0e-10 | 38.3 | 2.7e-05 | 0.029 | 14.5 |
| pfu_aug1.0_95340.1_13514.t1 | 3 | 3 | TPR_1 | 68 | 92 | 3.1e-15 | 55.0 | 9.3e-08 | 9.9e-05 | 21.7 |
| pfu_aug1.0_95340.1_13514.t1 | 2 | 2 | TPR_2 | 68 | 93 | 6.7e-06 | 25.6 | 8.7e-06 | 0.0092 | 15.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_95340.1_13514.t1 | gi|291231838|ref|XP_002735877.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_95340.1_13514.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_95340.1_13514.t1 atgttttgctacttttgatgttttgctacacttggtaaagtccacgatgcctttgtttcttaccgtaactccattgacaa atcagaggccagtgctgatacatggtgttccataggcgtgctgtatcagcagcagaatcagcctatggatgcactgcagg catatatatgtgctgtacagttggataaatctcacaccgctgcatggactgatctcggtgtattgtatgaaagctgtaat caacctaaagacgcacttgcatgttatttaaaggcaactagaaataaagggggaattaactctagtttagcaacaaaaat caaatttctacaacaacatttggaaagtgtagcagtacaacatttgcaaaataaacctagaactttacctagtatagagg aagcttttgccttaccgatccctgcagagctgacttcacgccaaggctcaattggccccacacctcag |
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Protein
| Protein ID | pfu_aug1.0_95340.1_13514.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_95340.1_13514.t1 MFCYFXCFATLGKVHDAFVSYRNSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDKSHTAAWTDLGVLYESCN QPKDALACYLKATRNKGGINSSLATKIKFLQQHLESVAVQHLQNKPRTLPSIEEAFALPIPAELTSRQGSIGPTPQ |
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