Gene
| Gene Model ID | pfu_aug1.0_955.1_29501 |
|---|---|
| Locus | scaffold955.1 : 1 ... 14432 : + |
| To GenomeBrowser | scaffold955.1:1..14432 |
| Genes list of scaffold | scaffold955.1 |
| Synonym | pfu_aug2.0_530.1_00852 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_955.1_29501.t2 | 1 | 1 | Arf | 1 | 89 | 1.1e-33 | 115.9 | 1.7e-37 | 1.2e-33 | 115.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| mix | 2 |
| egg-4cell | 1 |
| egg-4cell | 1 |
| 8-16cell | 2 |
| egg-Dshape | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| maleGonad | 2 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_955.1_29501.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_955.1_29501.t1 gtcttatatttgtggttgatagtaacgacagagaaagagtaggagaagctcgagaagagctgaacagaatgttaaacgaa gatgaattacgagacgctgtgttactagtctttgcaaataaacaggatttaccaaatgcaatgaatgcagcagaaattac agataaattaggacttcattctttacgaaatagaagctggtatattcaagcaacttgtgccacttctggggacggactgt atgaaggcctagattggatgtcggcacaacttaaaagtaaaaaatag |
|
| Transcript ID | pfu_aug1.0_955.1_29501.t2 |
| Definition | - |
>pfu_aug1.0_955.1_29501.t2 gtcttatatttgtggttgatagtaacgacagagaaagagtaggagaagctcgagaagagctgaacagaatgttaaacgaa gatgaattacgagacgctgtgttactagtctttgcaaataaacaggatttaccaaatgcgatgaatgcagcagaaattac agataaactaggacttcattctctacgaaatagaaactggtatattcaagcaacttgtgccacatctggagatggacttt atgaaggacttgactggctgtctaacgaactcaaaaaagcgaaatag |
|
Protein
| Protein ID | pfu_aug1.0_955.1_29501.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_955.1_29501.t1 LIFVVDSNDRERVGEAREELNRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRNRSWYIQATCATSGDGLY EGLDWMSAQLKSKK |
|
| Protein ID | pfu_aug1.0_955.1_29501.t2 |
| Definition | - |
>pfu_aug1.0_955.1_29501.t2 LIFVVDSNDRERVGEAREELNRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLY EGLDWLSNELKKAK |
|