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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_9563.1_68065
Locus scaffold9563.1 : 6368 ... 10205 : -
To GenomeBrowser scaffold9563.1:6368..10205
Genes list of scaffold scaffold9563.1
Synonym pfu_aug2.0_5019.1_32734

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_9563.1_68065.t1 1 1 zf-B_box 8 44 2.2e-09 37.0 7.5e-13 2.2e-09 37.0

Transcript
Transcript IDpfu_aug1.0_9563.1_68065.t1
Definition-
>pfu_aug1.0_9563.1_68065.t1
atgggaaaaatgaatatatcaaatatgtgccgagaccatgacgaaccatttttattcttctgcagaacttgtgacaagaa
tatttgtgcgaaatgtttgtcaacaaagcacaaaacacatgatttcatagatttgcgtgacctgcaatcagaggttcaga
ggcagttagatgacgtcatcaaagaaaaggaagacgaagtacagaaaatgacgaaagctcacgatgatttggatcagcat
gaaaatgagtcggaaaattatttaaaggagaagtatgcttcaatcgacgtaaatgtcaaagccattcaaagagccgctgc
tgaagaaggagagaaaataaaggcatctctttacgaaagaattgaacaacacgataaagaagtcaaggaaggaaaacaaa
aaattcaagctcaaacgaaagtccacagaaatgaaattcataccattcaacagacacttcgacttcagacagcgtcatca
tgcaataaattcgtcaaggagtcgaagtcaaaacttcagtccctccggtttttaccagttacgattccggatataagtca
attatttgcagagggaagagttgatagaaatcaaatccaccaaatgattggaaacgtaggggaaatgaccgaagtattag
gtatagatggtttaaatcgaaaggataaaacaaaaggcaatgtttcatcacaggttgaaagaattggtacattgaaacta
aataaaattgaacagtgtaagtctgcttgtctcagtcctgatggttgtatctggattggtggtaatggattcgtgtacaa
gatgaactccgactgctccaccgtcctccatcagatacctgctagggatccttcgtggccatgtcattacatagcatgtt
tacagtctggtgatgctgctgtatcttatggtggagcgtcctacgtagacagattcacatctgatgggagaagagtagaa
ttcacagacaaatcactgcggtacactcacgatatagctgtcaataacaatgacgaggttgttgtcaacgttgacagtca
atctttaatcatcttctctaacaatggcaaacaactcagagaaatcaaagtgaatggaggcatcaacacattgtgcatag
acagaaacggaaacttcatcatagcacactctagctcatccaacattaccgtagtggaagacacgagtggaaaagtcaaa
gcgacgttgtccgtttctacatctgacatcaagcgtcttacatgtgatggatacggaaatattattgctacaaagaggga
ggaagatgtttatttcttcaggcagaatgaagatgtagaaaacggtatcacagtggactgtgatgcaattatggaaatct
gtttgaatagtgaaggacatttattgatccttgtgaaggaagagaagaaatacaaaattcttgtcgcaaaatatttggaa
taa

Protein
Protein IDpfu_aug1.0_9563.1_68065.t1
Definition-
>pfu_aug1.0_9563.1_68065.t1
MGKMNISNMCRDHDEPFLFFCRTCDKNICAKCLSTKHKTHDFIDLRDLQSEVQRQLDDVIKEKEDEVQKMTKAHDDLDQH
ENESENYLKEKYASIDVNVKAIQRAAAEEGEKIKASLYERIEQHDKEVKEGKQKIQAQTKVHRNEIHTIQQTLRLQTASS
CNKFVKESKSKLQSLRFLPVTIPDISQLFAEGRVDRNQIHQMIGNVGEMTEVLGIDGLNRKDKTKGNVSSQVERIGTLKL
NKIEQCKSACLSPDGCIWIGGNGFVYKMNSDCSTVLHQIPARDPSWPCHYIACLQSGDAAVSYGGASYVDRFTSDGRRVE
FTDKSLRYTHDIAVNNNDEVVVNVDSQSLIIFSNNGKQLREIKVNGGINTLCIDRNGNFIIAHSSSSNITVVEDTSGKVK
ATLSVSTSDIKRLTCDGYGNIIATKREEDVYFFRQNEDVENGITVDCDAIMEICLNSEGHLLILVKEEKKYKILVAKYLE

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