Gene
| Gene Model ID | pfu_aug1.0_9582.1_17516 |
|---|---|
| Locus | scaffold9582.1 : 60066 ... 86132 : + |
| To GenomeBrowser | scaffold9582.1:60066..86132 |
| Genes list of scaffold | scaffold9582.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9582.1_17516.t1 | 3 | 1 | Ldh_2 | 9 | 55 | 1.8e-18 | 66.3 | 1.1e-10 | 1.7e-06 | 27.0 |
| pfu_aug1.0_9582.1_17516.t1 | 3 | 2 | Ldh_2 | 55 | 82 | 1.8e-18 | 66.3 | 9.0e-07 | 0.013 | 14.2 |
| pfu_aug1.0_9582.1_17516.t1 | 3 | 3 | Ldh_2 | 83 | 115 | 1.8e-18 | 66.3 | 4.6e-10 | 6.9e-06 | 25.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9582.1_17516.t1 | gi|346466671|gb|AEO33180.1| | 4.0e-19 |
Transcript
| Transcript ID | pfu_aug1.0_9582.1_17516.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9582.1_17516.t1 atgacagaaggagcccaaaacacggttccgaagtcggagcttcacggatttaccgtccgatgtatggaagctgttggaac caagactgcgcatgcgtcagctttggctgatcttttggtgtctgctgattacaggggacattatagccatggtctcaaca gattaggccccgtagttggcaaattctgcatagacctggcagtaaaaaaggcgaaagaagctgggataggatttgttacc gctagaggtggttacaaaggtttcggcttggctatgatggtggaaattttctgtggtatcctcagtggtgcaaactttgg cccaaacatcagaagctggaaagaattcggaaaagttgccaatcttaccaagaaggtaaaaggaaaatgtacatcccata tgctatatacggatcactttgcaagcctagactccgatatccgttttactcatcaaaatctacccatggcgaattcatac agtgaatgtattccatatattgttttcattttcgtgcatgaacatcgacggcgggtgcggctagccaaacaggaggcagt ggatcctgactgtgatattgaccagtag |
|
Protein
| Protein ID | pfu_aug1.0_9582.1_17516.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9582.1_17516.t1 MTEGAQNTVPKSELHGFTVRCMEAVGTKTAHASALADLLVSADYRGHYSHGLNRLGPVVGKFCIDLAVKKAKEAGIGFVT ARGGYKGFGLAMMVEIFCGILSGANFGPNIRSWKEFGKVANLTKKVKGKCTSHMLYTDHFASLDSDIRFTHQNLPMANSY SECIPYIVFIFVHEHRRRVRLAKQEAVDPDCDIDQ |
|