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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_95836.1_35156
Locus scaffold95836.1 : 7 ... 1614 : +
To GenomeBrowser scaffold95836.1:7..1614
Genes list of scaffold scaffold95836.1
Synonym pfu_aug2.0_2561.1_05578

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_95836.1_35156.t1 1 1 Coiled-coil_56 28 100 1.1e-08 34.9 9.3e-13 1.4e-08 34.6

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
adductorMuscle 1

Transcript
Transcript IDpfu_aug1.0_95836.1_35156.t1
Definition-
>pfu_aug1.0_95836.1_35156.t1
atgacttcaaaagttgtaaatacagtgaaaaatggtaaagaagtgatatcaaaactgaatgacttgaatttaccagacat
aaatataaaaaaagaattaaaatcgctgcaccctcaccaacaatatctcgtgaaaaaatatgaaaggttgaacaaggaca
gattctcacatttccacagaaatcatattgtgtatggaagaacaagaggaattgctctcgggctttgggcagtatcgatt
tatctttacacagtatataccatgaaacaagaacatttcttggatgaaatccctgacgacttaccaccactggagacgga
cgaaacccctgttcaaagtgaaccaacttctactccgcaggcgtcacagaaaacatga

Protein
Protein IDpfu_aug1.0_95836.1_35156.t1
Definition-
>pfu_aug1.0_95836.1_35156.t1
MTSKVVNTVKNGKEVISKLNDLNLPDINIKKELKSLHPHQQYLVKKYERLNKDRFSHFHRNHIVYGRTRGIALGLWAVSI
YLYTVYTMKQEHFLDEIPDDLPPLETDETPVQSEPTSTPQASQKT

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