Gene
| Gene Model ID | pfu_aug1.0_95939.1_06229 |
|---|---|
| Locus | scaffold95939.1 : 1 ... 1610 : - |
| To GenomeBrowser | scaffold95939.1:1..1610 |
| Genes list of scaffold | scaffold95939.1 |
| Synonym | pfu_aug2.0_484.1_14214 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_95939.1_06229.t1 | 1 | 1 | adh_short | 2 | 114 | 2.7e-10 | 40.4 | 1.3e-13 | 3.7e-10 | 39.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_95939.1_06229.t1 | gi|260836807|ref|XP_002613397.1| | hypothetical protein BRAFLDRAFT_118764 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| adductorMuscle | 2 |
Transcript
| Transcript ID | pfu_aug1.0_95939.1_06229.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_95939.1_06229.t1 gtgctcgagtcattctagcttgtagagatataacgaaagccgagcgagctgcagctgacattaggtctataacacacaat gaaaatgtcctggtgcgcattgttgatttagcctcattgagatctgtcagcagatttgctaatgaagtattaaaaacaga agaaaaaattcacatacttattaataatgcaggggtaatgatgtgtccatactggcagacagaagatggatttgagatgc aattcgggacaaatcatcttggtcatttccttctcactaacctactgctggccagaataaaagattcagcgccggcccgt attattaatgtatcttctcttgtccatagtcgtcctgttacgtttgattttgatcatctaaatgatgagaaaacatatcg tccaatcacagcctatcagcagagtaaattagccaatgtcctatttacaagggagctcagtaaaagactggcag |
|
Protein
| Protein ID | pfu_aug1.0_95939.1_06229.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_95939.1_06229.t1 ARVILACRDITKAERAAADIRSITHNENVLVRIVDLASLRSVSRFANEVLKTEEKIHILINNAGVMMCPYWQTEDGFEMQ FGTNHLGHFLLTNLLLARIKDSAPARIINVSSLVHSRPVTFDFDHLNDEKTYRPITAYQQSKLANVLFTRELSKRLA |
|