Gene
| Gene Model ID | pfu_aug1.0_962.1_58323 |
|---|---|
| Locus | scaffold962.1 : 59245 ... 62175 : - |
| To GenomeBrowser | scaffold962.1:59245..62175 |
| Genes list of scaffold | scaffold962.1 |
| Synonym | pfu_aug2.0_1443.1_11672 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_962.1_58323.t1 | 1 | 1 | zf-C3HC4_3 | 13 | 65 | 1.8e-06 | 27.5 | 9.7e-10 | 1.8e-06 | 27.5 |
| pfu_aug1.0_962.1_58323.t1 | 2 | 1 | zf-C3HC4 | 15 | 57 | 1.0e-08 | 34.6 | 5.7e-12 | 1.0e-08 | 34.6 |
| pfu_aug1.0_962.1_58323.t1 | 2 | 1 | zf-RING_2 | 15 | 61 | 8.9e-06 | 25.4 | 4.8e-09 | 8.9e-06 | 25.4 |
| pfu_aug1.0_962.1_58323.t1 | 2 | 2 | zf-C3HC4 | 57 | 79 | 1.0e-08 | 34.6 | 0.091 | 170.0 | 1.9 |
| pfu_aug1.0_962.1_58323.t1 | 2 | 1 | zf-B_box | 99 | 145 | 8.6e-09 | 35.1 | 3.2e-08 | 5.9e-05 | 22.8 |
| pfu_aug1.0_962.1_58323.t1 | 2 | 2 | zf-B_box | 160 | 191 | 8.6e-09 | 35.1 | 2.9e-09 | 5.4e-06 | 26.2 |
| pfu_aug1.0_962.1_58323.t1 | 2 | 2 | zf-RING_2 | 177 | 193 | 8.9e-06 | 25.4 | 0.58 | 1100.0 | -0.5 |
Transcript
| Transcript ID | pfu_aug1.0_962.1_58323.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_962.1_58323.t1 atggcaacttcgaacagttctccatttacagaactaacgttgtgtcctctttgctttgagagatttaaatgtccaaaaac tcttccatgtttacataacttttgtgaatcgtgcatcgggagttatattgcatcggtatttgagaaagaaaatgttaagt gtgtcagttgtcccatttgccgagcggatgttcaaaagccacaacacgtaaatacatcggaggaatggactaaatgtcta ccgacaaatcatatgttagtaagcatgctcgatgcggttactggttttcaacatgaaattatttgcaattcatgcaatat cgaaaacaaaaccgaaagtgcagtatattggtgtgcggattgtcgaaaggcactttgtgaactctgtgaacgcaaacata catactttatacacggacacaatgttgtaaatttgatgaaaatgactgaaattgaaccaaaggcattgagtgtcagcgtc aagtgtccaaggcacgaagagaaagttatagaagcgtactgctttgaccacaataccccttgttgttcatcttgcgttat gattacccatcggaaatgcaacagagtcgaagaagcaaagaatgcagcagaggaaatgagaaattcgaaacagatggttg aattacaggaaaattttgagatttatagaaaggaaatgggtcagctgacagacgaagctactgagaatgtaaattcattc aaggatgaattagccgatattcataatgaaatcacaacgtttcgatcacatataaacagacaattggacgacatagaact gaaagcaaaacaagaactaaatgcccttgagaaagaacatttaccagaaatggaagcaacagtacaaataatgtcaggag aaacaaaacgagcagagaatgatttgatgattttgaaggcaagtgtccaatatgcatcagatgagcagctgttgtgcgat attggaaaactgagaaaggaatccaacaaagtcaaagaaatttgggatgaaaacagaacaaagatcaagaaaaagaagct gatctttaaaatgaatgatgaattaaaaactctagaaaatgtccagaccctcatgcatgtaaaccttacagaggagaaga tggtcttggaatcggatccagttgaccttctcagggctgagccggtgaaagtatctcaatttggtacagaatggaaatgt tccaatatcacaggatgtgtcatggttgatgacaaaaggctgctggttgcaacatattcacttaagcgcctagaaatgta ctaa |
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Protein
| Protein ID | pfu_aug1.0_962.1_58323.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_962.1_58323.t1 MATSNSSPFTELTLCPLCFERFKCPKTLPCLHNFCESCIGSYIASVFEKENVKCVSCPICRADVQKPQHVNTSEEWTKCL PTNHMLVSMLDAVTGFQHEIICNSCNIENKTESAVYWCADCRKALCELCERKHTYFIHGHNVVNLMKMTEIEPKALSVSV KCPRHEEKVIEAYCFDHNTPCCSSCVMITHRKCNRVEEAKNAAEEMRNSKQMVELQENFEIYRKEMGQLTDEATENVNSF KDELADIHNEITTFRSHINRQLDDIELKAKQELNALEKEHLPEMEATVQIMSGETKRAENDLMILKASVQYASDEQLLCD IGKLRKESNKVKEIWDENRTKIKKKKLIFKMNDELKTLENVQTLMHVNLTEEKMVLESDPVDLLRAEPVKVSQFGTEWKC SNITGCVMVDDKRLLVATYSLKRLEMY |
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