Gene
| Gene Model ID | pfu_aug1.0_9627.1_09982 |
|---|---|
| Locus | scaffold9627.1 : 16526 ... 28344 : + |
| To GenomeBrowser | scaffold9627.1:16526..28344 |
| Genes list of scaffold | scaffold9627.1 |
| Synonym | pfu_aug2.0_3454.1_15794 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9627.1_09982.t1 | 3 | 1 | zf-C2H2_4 | 25 | 48 | 1.2e-08 | 34.6 | 1.7e-07 | 0.00036 | 20.6 |
| pfu_aug1.0_9627.1_09982.t1 | 3 | 1 | zf-C2H2 | 25 | 48 | 2.0e-08 | 34.0 | 3.9e-08 | 8.2e-05 | 22.7 |
| pfu_aug1.0_9627.1_09982.t1 | 3 | 2 | zf-C2H2_4 | 54 | 76 | 1.2e-08 | 34.6 | 6.4e-07 | 0.0013 | 18.8 |
| pfu_aug1.0_9627.1_09982.t1 | 3 | 2 | zf-C2H2 | 54 | 75 | 2.0e-08 | 34.0 | 1.1e-05 | 0.022 | 15.0 |
| pfu_aug1.0_9627.1_09982.t1 | 3 | 3 | zf-C2H2_4 | 392 | 411 | 1.2e-08 | 34.6 | 0.002 | 4.2 | 7.9 |
| pfu_aug1.0_9627.1_09982.t1 | 3 | 3 | zf-C2H2 | 392 | 411 | 2.0e-08 | 34.0 | 0.00041 | 0.88 | 10.0 |
| pfu_aug1.0_9627.1_09982.t1 | 1 | 1 | rve | 1031 | 1135 | 9.5e-17 | 61.2 | 1.8e-19 | 3.9e-16 | 59.2 |
Transcript
| Transcript ID | pfu_aug1.0_9627.1_09982.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9627.1_09982.t1 atgaattttccatatctgggctttcaacaagaatctcctccgtactctcaccatcagatggcacctttaaaatttgaatg tgtactttgcggaaaatcctttactcgtcgctcagcactagatcgtcatagtcggacggttcatggcggggagtccatca aatgtgaattttgtggacataatttcagtcgaaaagacagttatcttcgacatgtaaagacacatcatgtcagtagacac gatgaagaagacattcaaaccttgcagcaaggtgggggtaagctcgatgacgcaacagcagacaaagcagagccccgagt caatgaacctcttgataatgatcaaacatgtttttctgaggaagaggcaatcaatgggaatctcaacaaatttaccatga aagctgacgatcagacaaaatatgatcctcttacatttctgaagtcaaaagaggactctattagatcgctccttaaaaaa gctgtcttgaaaagacggggtatcaaggtatacattaccatgctagtgcgattctccaaacagagaggggaccaagtgga gacaaccgatccctattttcatggacggtgtcacatcatcttaaaacttgatgatatcgatatggcaataaaggaaagca tgaagaaaatcatgacatcttttatcgagtaccagagagaggggagcaactggacattagacaaagtacttcagattgat attaacatagccaactacagaccaatcaagggatcaagctttataccccttccagcaaagttagcagcaaagaaagctat tgtcaatgttcagaataccgacgataaatgtttcatgtggtccgttctagcagctctccatcctcttcagggacatcatg ctaattcgaacagagtgtccaactacgtgaaatatatagatgaattcgactttacagggatcaacttccctgtcaaagta tcagatattcctagattcgaaattaggaatgacatctccatcaacgtctttggttatgaaaaaggagatatataccccct ccatctgaccaatgaaaggggactccaacatgtcaatctattgctgatatcagataaagagaaacaacactattgttgga ttaagaacttcaaccgtctcctaggtgatcaaaatgacgacaacaatcaatatcattattgtcattattgcctacatgga ttcactaagaagtctctcctcaaaaagcacattccctactgtaaagtgcatggagcacagcgtacagaaatgccacgaga agaagataaatggttgcgattcacggatgtttcaaaacgactgaaagtcccctttgtcgtgtatgcagactttgagtgta ttttagagaagatacatggttgccaacccgatccatcaaaatcatcaaccattaaactagcaaagcacaaaccatctgga tttacctataaagttgtaggtcttaacgaagatcttacagaggatcacgtgacgtatagaggtccaaatgcggcagacgt ctttatagatcacatggtcgaattagaggagcgcttgatacacgttgtccgaaattctaaaccaatggagttgacagacg acgattttgaatctttccaaaaagcaacgcactgcagcatttgtggaagagaacttgatggtgaagtggcacgtgatcat tgtcacgtgactggtaaattcagaggggctgcacacatgtcgtgtaatcttaattataaattaagagagcgaatcccagt attttttcacaatcttcggggatatgatgcccatctcatcatggaatccattggcaaagtcaaaaaccgacggttgaact gtattccacagaaccacgaaaaatacatctccttctcccttggaagaatggagtttatcgacaccttccagtttctatcc actggtcttcagaaattggtagaaaatctatcggaggaagatgcatccaaattcagccatctacaaagttacatacaaaa aagccatccaaaaaatgcaaagatcaaaacggaattattgagtcggaaaggagtgtacccttaccgctacatgagcacct ttagtagatttaacgaaacaaatctacctcccaaagaagccttctacaacgaccttactgaaagtcatatctcagaggag gattacttccatgcccaattagtatgggatgttctcaacatcaagaacctcggggagtatcatgatctctacatggagac ggatgttcacctcctggcagacgtgtttgagaacttcagaactctttgtttgaacaaatatgaattagacccagctcact tttacacgtcacccggtttggcgtggcaggcagctctcaagatgacaggtgttgacctggaattgttcacagatcctgac atgcacttattcatagaaaaaggtttaaggggtggtgtagccatgattacaaagagatatgccaaagctaatatctccct actcaaggaatatgatgccaataaagacatcagtagtttgatctacctggacgctaataacctatatggatgggggatga gtcaacctttgcctacccatgattttgattggctcaacgaaggagaaattgcaacactcgatgtaacatctctacctcct actggagacaatggatatattttagaggtggatttagagtatccaaaagatcttcatgatcatcacaatgattatccttt ggcaccagaatctttggaaatcaggcgggaaatgctgtcaccgtaccaaacaaggcttctcaaagatcttggcatgaaag caactaaatgttccaaactggtaccgaatctacgcgacaaagaaaaacccatgtcgtgggaagactatcttaaggaaatt tactataatccggtcaatgcaggaagtttctccggaccggataaattatatcgctatgtcaagaaggcgggaaaatacgt catcagcaaatacagaatccgaaaatggttacaaagacaggaaccctatagcttacagagaccccttgtgagaaagttca agagaaacacggtgatcaccttgggtatcgacgatcaatgggacgccgacctgatggatatgaccaagtttgcgaaagaa aatgatggatattcctacatcctcgtagtcattgatattttttcaaaatatctatggctaagacccacgctggataaacg aggagaaagtatcacagctgcctttaaagcgattttggatgaggggagacaaccaaccagaatccgtacagacaaaggcc aagaatttaaatctaggagttttaatgccctcctaaaaagaaacaatattgagcatctctatgcacagaatacagaaata aaagccaactatgcagaaagagtcatcaagacggtcaaagccaaaatatatcgatacatgacgtataagcaatcgcagcg ctatgtggatcgtttggaagacttcaacaccaactataactctacgttccatcgtacgatcggtatggctcccgacaaag tcaatgaatccaaagaaacaaatctttggtggaaaatgtactggcccaaaaaagcctttggttgcagggaaactgaaaca aacaagaaaaccgtttaa |
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Protein
| Protein ID | pfu_aug1.0_9627.1_09982.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9627.1_09982.t1 MNFPYLGFQQESPPYSHHQMAPLKFECVLCGKSFTRRSALDRHSRTVHGGESIKCEFCGHNFSRKDSYLRHVKTHHVSRH DEEDIQTLQQGGGKLDDATADKAEPRVNEPLDNDQTCFSEEEAINGNLNKFTMKADDQTKYDPLTFLKSKEDSIRSLLKK AVLKRRGIKVYITMLVRFSKQRGDQVETTDPYFHGRCHIILKLDDIDMAIKESMKKIMTSFIEYQREGSNWTLDKVLQID INIANYRPIKGSSFIPLPAKLAAKKAIVNVQNTDDKCFMWSVLAALHPLQGHHANSNRVSNYVKYIDEFDFTGINFPVKV SDIPRFEIRNDISINVFGYEKGDIYPLHLTNERGLQHVNLLLISDKEKQHYCWIKNFNRLLGDQNDDNNQYHYCHYCLHG FTKKSLLKKHIPYCKVHGAQRTEMPREEDKWLRFTDVSKRLKVPFVVYADFECILEKIHGCQPDPSKSSTIKLAKHKPSG FTYKVVGLNEDLTEDHVTYRGPNAADVFIDHMVELEERLIHVVRNSKPMELTDDDFESFQKATHCSICGRELDGEVARDH CHVTGKFRGAAHMSCNLNYKLRERIPVFFHNLRGYDAHLIMESIGKVKNRRLNCIPQNHEKYISFSLGRMEFIDTFQFLS TGLQKLVENLSEEDASKFSHLQSYIQKSHPKNAKIKTELLSRKGVYPYRYMSTFSRFNETNLPPKEAFYNDLTESHISEE DYFHAQLVWDVLNIKNLGEYHDLYMETDVHLLADVFENFRTLCLNKYELDPAHFYTSPGLAWQAALKMTGVDLELFTDPD MHLFIEKGLRGGVAMITKRYAKANISLLKEYDANKDISSLIYLDANNLYGWGMSQPLPTHDFDWLNEGEIATLDVTSLPP TGDNGYILEVDLEYPKDLHDHHNDYPLAPESLEIRREMLSPYQTRLLKDLGMKATKCSKLVPNLRDKEKPMSWEDYLKEI YYNPVNAGSFSGPDKLYRYVKKAGKYVISKYRIRKWLQRQEPYSLQRPLVRKFKRNTVITLGIDDQWDADLMDMTKFAKE NDGYSYILVVIDIFSKYLWLRPTLDKRGESITAAFKAILDEGRQPTRIRTDKGQEFKSRSFNALLKRNNIEHLYAQNTEI KANYAERVIKTVKAKIYRYMTYKQSQRYVDRLEDFNTNYNSTFHRTIGMAPDKVNESKETNLWWKMYWPKKAFGCRETET NKKTV |
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