Gene
| Gene Model ID | pfu_aug1.0_964.1_00569 |
|---|---|
| Locus | scaffold964.1 : 19694 ... 37635 : - |
| To GenomeBrowser | scaffold964.1:19694..37635 |
| Genes list of scaffold | scaffold964.1 |
| Synonym | pfu_aug2.0_113.1_10285 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | WntA |
| Description | phylogenetic tree shows close affinity to squid (Euprymna scolopes) WntA. BLAST result closest to P. dumerilii WntA CAD37169.2 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_964.1_00569.t1 | 1 | 1 | wnt | 52 | 358 | 0.0 | 394.5 | 0.0 | 0.0 | 394.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_964.1_00569.t1 | gi|343958028|emb|CAD37169.2| | Wnta protein [Platynereis dumerilii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_964.1_00569.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_964.1_00569.t1 atgcagattacatcggagcagttgctgagtttctttatacccattgctttcctggtacacagtacacagtcatcttggtg gtacctaggaatcattagcacctcacaacctacaatgagagagctggaaaccaaagaagacgccgtcagtacgtgctctg atatgaaatttttggcgccaaagcaaagacagctgtgccgagagagcaatgagaagaaacttttacaagtgatcagtaac ggagcttctgttggaataaatgaatgtcaacatcagttttcaacgaggcgatggaattgttctacattcaactccactga tgttttcggtggcattctaagaaagaagagccgagaaacagcctatatttacgcaatttcatctgcgggtgtgatgcaca gtattacaagagcatgcgcgaaaggagagttggatcattgcggatgtgacgtcaaggtgcgcagaaaagacactgccggt caatttgaatggggtggttgttccgagaacattcgatacggcgcaaaattttcacgtgaatttgtggattccaaggagga aagaaaatcagcatcacagttaatgaacttatggaataatgaagcaggcagaaaggctatcaaaaatcagatggagttgg tttgtaaatgccacggagtttccgcttcctgttccgttaaaatatgttggcgcaaaatgcgtaacttcagattgattgga caatttttaaaagataaattcgatggcgcaagcttagtaaaatataacaaaagaaaaaataaactaaagagaagaaccag agacatgaaaaagccgaccaaaaaagacttagtatatctagaagaatcaccagacttttgtgaatatgatttgaggtctg gttccctggggaccaagggtaggcagtgtgacaaagacagtctgggtatagatggttgtacgctaatgtgctgtgggagg ggttattataccattgttagagaacttaaggaagactgtgactgtaaatttgtatggtgttgtcgagtggactgcaaaaa gtgttcacaacgtgtggaactgcattactgtaactaa |
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Protein
| Protein ID | pfu_aug1.0_964.1_00569.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_964.1_00569.t1 MQITSEQLLSFFIPIAFLVHSTQSSWWYLGIISTSQPTMRELETKEDAVSTCSDMKFLAPKQRQLCRESNEKKLLQVISN GASVGINECQHQFSTRRWNCSTFNSTDVFGGILRKKSRETAYIYAISSAGVMHSITRACAKGELDHCGCDVKVRRKDTAG QFEWGGCSENIRYGAKFSREFVDSKEERKSASQLMNLWNNEAGRKAIKNQMELVCKCHGVSASCSVKICWRKMRNFRLIG QFLKDKFDGASLVKYNKRKNKLKRRTRDMKKPTKKDLVYLEESPDFCEYDLRSGSLGTKGRQCDKDSLGIDGCTLMCCGR GYYTIVRELKEDCDCKFVWCCRVDCKKCSQRVELHYCN |
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