Gene
| Gene Model ID | pfu_aug1.0_964.1_00570 |
|---|---|
| Locus | scaffold964.1 : 38325 ... 45695 : - |
| To GenomeBrowser | scaffold964.1:38325..45695 |
| Genes list of scaffold | scaffold964.1 |
| Synonym | pfu_aug2.0_113.1_10286 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_964.1_00570.t1 | 1 | 1 | GRIM-19 | 12 | 84 | 1.5e-13 | 50.5 | 2.5e-17 | 1.9e-13 | 50.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 2 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_964.1_00570.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_964.1_00570.t1 atggttctcgtcgacttcccccgagcaagggttaccgagttgaaggacagttacatagcattagagccactttttacggc agaagatgatagagagattatgaagataaagaggagaaatagagatatggagaacgaactgatgaagaacgtaccagact gggagacaggaaccttgtggggtaccccaatctactataacaaaaaaatgcgttatgaaatcccagagtcgtttgcagaa cttaatgctcattctccagccctgaaagattcagaccattgggaaattcgataa |
|
Protein
| Protein ID | pfu_aug1.0_964.1_00570.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_964.1_00570.t1 MVLVDFPRARVTELKDSYIALEPLFTAEDDREIMKIKRRNRDMENELMKNVPDWETGTLWGTPIYYNKKMRYEIPESFAE LNAHSPALKDSDHWEIR |
|