Gene
Gene Model ID | pfu_aug1.0_964.1_00570 |
---|---|
Locus | scaffold964.1 : 38325 ... 45695 : - |
To GenomeBrowser | scaffold964.1:38325..45695 |
Genes list of scaffold | scaffold964.1 |
Synonym | pfu_aug2.0_113.1_10286 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_964.1_00570.t1 | 1 | 1 | GRIM-19 | 12 | 84 | 1.5e-13 | 50.5 | 2.5e-17 | 1.9e-13 | 50.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-4cell | 2 |
8-16cell | 1 |
egg-Dshape | 1 |
trochophore | 1 |
>Adult tissues | |
Dshape | 1 |
adductorMuscle | 1 |
maleGonad | 1 |
mantle | 1 |
mantleEdge | 1 |
mantlePallium | 1 |
pearlSac | 1 |
Transcript
Transcript ID | pfu_aug1.0_964.1_00570.t1 |
---|---|
Definition | - |
>pfu_aug1.0_964.1_00570.t1 atggttctcgtcgacttcccccgagcaagggttaccgagttgaaggacagttacatagcattagagccactttttacggc agaagatgatagagagattatgaagataaagaggagaaatagagatatggagaacgaactgatgaagaacgtaccagact gggagacaggaaccttgtggggtaccccaatctactataacaaaaaaatgcgttatgaaatcccagagtcgtttgcagaa cttaatgctcattctccagccctgaaagattcagaccattgggaaattcgataa |
Protein
Protein ID | pfu_aug1.0_964.1_00570.t1 |
---|---|
Definition | - |
>pfu_aug1.0_964.1_00570.t1 MVLVDFPRARVTELKDSYIALEPLFTAEDDREIMKIKRRNRDMENELMKNVPDWETGTLWGTPIYYNKKMRYEIPESFAE LNAHSPALKDSDHWEIR |