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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_96452.1_35164
Locus scaffold96452.1 : 1 ... 1594 : +
To GenomeBrowser scaffold96452.1:1..1594
Genes list of scaffold scaffold96452.1
Synonym pfu_aug2.0_707.1_24324

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_96452.1_35164.t1 1 1 RVT_1 13 135 7.7e-21 74.4 2.9e-24 2.2e-20 72.9

Transcript
Transcript IDpfu_aug1.0_96452.1_35164.t1
Definition-
>pfu_aug1.0_96452.1_35164.t1
gccaaggtttgaagacgttgtagatacactaggggaagcaaaagctcagtacttttcagtcattgatttggcaagtggtt
tttatcaaataccattagatgaaaatacaaaacacaaatcagcattcattacacatcagggtgtatatcaattcaagaga
ttaccatttggattaatgaatagtccaatttcatttcaagctctcatgacaaatgtcttacaaagtctactttggacaac
agctcttgtttacattgatgatgtcatcatattttcaaaatctttcacacaacaccttaaagatttacagcatgtatttt
caaagctcagagatgcaaatttgacactacagccaacaaaatgcaactttgcttgcagtcaggtacaatatttgggtcat
atcatcagtaaagatggaatcatggtagatccacagaaaacacaggctatagattcttttcctacaccaaaatcagtcaa
acaagtcaaatcttttcttggtgtttgtaactattacagaaaatttgtacaaaattacgcaaaaatagttacaccattga
ccacactcacacgcaaagatacaaaatttcattgggaagagggtcaacaacatgcatttcaaacactgaagcagaaactc
acatctgcacctattttagtttatccagactttcagaaaccattcataatctctacagatgcatcagacacagctatagg
ctttgtattgggacaaaaagacaacactggtcgtgaacatgcaatagcatatggtggtagacagttacacagagaagaaa
agaaatggcatatttcagaaaaagagggtttgagtcttgttgaagcagtaaaacaatttaggccatatgttgcaaacaca
aaattcacagtttacacagacaacattgctctcaaatggttgaatgacatcagaaacatgaatgggagattaggtcgctg
gtctctttttctacaaggatttaattttgaaattaaacacaaaccaggggcaaataactccaatgcagacgggttatcta
ggagggattacacagtaacaacagttacacaacaagttaactcaatgacagaacaacatgacacaagtacaaacacttta
caagtgacatttgcatacaaatacgaaaatgaacaacaagtctttgcattgaacccagtgtcagttacaaacaatactaa
cagtaacactcaaaatcaacctagtgatgtagaggtcaatgacaaacttaagcagcttcagcagtcttgttctgactttg
aggatgtctacaagtatttagtgcagagagaggtcccagaggatgctggatcagccagacgtactgtagcagagtcccat
acataccaagtgatcgatgatatattgtatcacctctaccaagatagaaacagaggggttcctagagatcaacggatcat
caaacaactagcagttcccagagtgctacgtgatgacctgttgaaatcgtaccatgactctatcgctggaggtggtcacc
aaggttacgaaaggacatatgaagccatgcggttgaagtatttctggccacgcatgtatacagacatcatgcac

Protein
Protein IDpfu_aug1.0_96452.1_35164.t1
Definition-
>pfu_aug1.0_96452.1_35164.t1
PRFEDVVDTLGEAKAQYFSVIDLASGFYQIPLDENTKHKSAFITHQGVYQFKRLPFGLMNSPISFQALMTNVLQSLLWTT
ALVYIDDVIIFSKSFTQHLKDLQHVFSKLRDANLTLQPTKCNFACSQVQYLGHIISKDGIMVDPQKTQAIDSFPTPKSVK
QVKSFLGVCNYYRKFVQNYAKIVTPLTTLTRKDTKFHWEEGQQHAFQTLKQKLTSAPILVYPDFQKPFIISTDASDTAIG
FVLGQKDNTGREHAIAYGGRQLHREEKKWHISEKEGLSLVEAVKQFRPYVANTKFTVYTDNIALKWLNDIRNMNGRLGRW
SLFLQGFNFEIKHKPGANNSNADGLSRRDYTVTTVTQQVNSMTEQHDTSTNTLQVTFAYKYENEQQVFALNPVSVTNNTN
SNTQNQPSDVEVNDKLKQLQQSCSDFEDVYKYLVQREVPEDAGSARRTVAESHTYQVIDDILYHLYQDRNRGVPRDQRII
KQLAVPRVLRDDLLKSYHDSIAGGGHQGYERTYEAMRLKYFWPRMYTDIMH

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