Gene
| Gene Model ID | pfu_aug1.0_9669.1_38949 |
|---|---|
| Locus | scaffold9669.1 : 17406 ... 26885 : + |
| To GenomeBrowser | scaffold9669.1:17406..26885 |
| Genes list of scaffold | scaffold9669.1 |
| Synonym | pfu_aug2.0_565.1_17578 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9669.1_38949.t1 | 3 | 1 | DCX | 160 | 217 | 1.1e-22 | 79.4 | 1.1e-17 | 8.0e-14 | 50.9 |
| pfu_aug1.0_9669.1_38949.t1 | 3 | 2 | DCX | 300 | 337 | 1.1e-22 | 79.4 | 4.7e-09 | 3.5e-05 | 23.3 |
| pfu_aug1.0_9669.1_38949.t1 | 2 | 1 | PLAT | 335 | 389 | 2.7e-30 | 105.0 | 1.0e-12 | 7.7e-09 | 35.9 |
| pfu_aug1.0_9669.1_38949.t1 | 2 | 2 | PLAT | 412 | 520 | 2.7e-30 | 105.0 | 3.2e-22 | 2.4e-18 | 66.5 |
| pfu_aug1.0_9669.1_38949.t1 | 3 | 3 | DCX | 440 | 450 | 1.1e-22 | 79.4 | 0.053 | 390.0 | 0.7 |
Transcript
| Transcript ID | pfu_aug1.0_9669.1_38949.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9669.1_38949.t1 atggaaaatgtggccgatccggaaatcggaactcaagacctgcttacagggcagacgctcttactgactcacagagctaa cctggctcgataccggaactgtaagaatgaaactgacaattgtgtatgcatatacatagatgatgtgacaaagggcgtat ataccactcttccattcggaatggctaccaaagagccccaagatgaagacaccgacattgttaaactagaggatagcgat tctagtactacgaaaggaaaaaatgcaggtgacaagtcaagtgatactcaaagtcctcaccgacttaaacctgtacgagt atatggacatcctaatgtgaccagtggggacagtaaaagtgttgtagaagtaggaaatacaaaaatggaagacaccagga aaactaatactgcaggaaatgaaaccaagacttgctacttctttaaagaccatgatcattcatttccaggtgttaaagta gccataaatccacgtagatataagaaatttgatactttactgcaagaactatccaaaaagattccagggttaggatttgg ggtaaggacagttgcaactccagatggaaaagataggatctcaaatttagatggattgactcacgatggaaattatattt gtacatcaagccgtctgatagtaagaggattggatattagtcgagttgcacccagagaagtgtggagattagctcgtcct ccaagtggccggaggatttataacaatatgcttagggaagactttaattatacagagtctaaagtcttgaaacgcactgt aaaacaaagaagtaatcaaatgtacagagcatatgttcgcaatgaacctaaaaaagtgacagtgttaaaaaactctgatc caacacaaaaacacctccttttgttaaacagacggactggacaacagtttgagcaagtactgtctgacctgagtggaatg tttggctttcgtatagagaaactttataccacagaaggcaaaaagattaatatagggaatgttggtgagatatacaagat tcggatagctcatgacaattctggtgactcccctggatggctatgtgatgagattcgtatgaaggaccttgacacagatg aggaattacagtttgtctgtcaccgttggttagctcgtgatgaggatgatggagagatctgtagagagcttcctgcagta aggaaatatgagccgtccctatcattggtacggtacagtgtctatgtgacaacaggaagcctttggaatgctgggacaga tgccaatgtttatatgacaatgtatggagataaaggtgacacaggggtcagacagctatactcctctaataaatcctcac ttttcaagcaaggaaagactgatatgtttacagtagaagctgttgcacttggacatctcaaacgaattattgtaggacat gatggaactgggccaggcctaggttggcacttagagaggatagttgtgaaggaacctggacacaaagaacacgaggcaaa tgttttctactgtggaaaatggctagatgaaggagaagatgacggtaaaatagtacgtgaacttaagctacaggacgagt acatggatgacatactagagaagcgtaatgtgagtgacgccagttaa |
|
Protein
| Protein ID | pfu_aug1.0_9669.1_38949.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9669.1_38949.t1 MENVADPEIGTQDLLTGQTLLLTHRANLARYRNCKNETDNCVCIYIDDVTKGVYTTLPFGMATKEPQDEDTDIVKLEDSD SSTTKGKNAGDKSSDTQSPHRLKPVRVYGHPNVTSGDSKSVVEVGNTKMEDTRKTNTAGNETKTCYFFKDHDHSFPGVKV AINPRRYKKFDTLLQELSKKIPGLGFGVRTVATPDGKDRISNLDGLTHDGNYICTSSRLIVRGLDISRVAPREVWRLARP PSGRRIYNNMLREDFNYTESKVLKRTVKQRSNQMYRAYVRNEPKKVTVLKNSDPTQKHLLLLNRRTGQQFEQVLSDLSGM FGFRIEKLYTTEGKKINIGNVGEIYKIRIAHDNSGDSPGWLCDEIRMKDLDTDEELQFVCHRWLARDEDDGEICRELPAV RKYEPSLSLVRYSVYVTTGSLWNAGTDANVYMTMYGDKGDTGVRQLYSSNKSSLFKQGKTDMFTVEAVALGHLKRIIVGH DGTGPGLGWHLERIVVKEPGHKEHEANVFYCGKWLDEGEDDGKIVRELKLQDEYMDDILEKRNVSDAS |
|