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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_96977.1_64165
Locus scaffold96977.1 : 199 ... 1035 : -
To GenomeBrowser scaffold96977.1:199..1035
Genes list of scaffold scaffold96977.1
Synonym pfu_aug2.0_137.1_23537

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_96977.1_64165.t1 1 1 Cupin_8 57 131 2.4e-06 27.2 1.9e-10 2.8e-06 27.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_96977.1_64165.t1 gi|196006503|ref|XP_002113118.1| predicted protein [Trichoplax adhaerens] 5.0e-22

Transcript
Transcript IDpfu_aug1.0_96977.1_64165.t1
Definition-
>pfu_aug1.0_96977.1_64165.t1
atgttcttcttgtgctcgagttatattgttcagtcaatttgtgtagtaatatttttattgaaactctgtttgtctgaaag
aatattagaaaatgaggcaggccacttaaaaccatttggagccaccaattctgttttggacgtggaaagaatttccggat
tcccgaatccaagaacattttttgaaaaatatgcaattcctaaaaggccgttagtgatgagagatgcggcaaaagtttct
cgtgcctttcacctgtggacagacgaatatttctactctgcagagggttcaaagtcacacaaagtcagcacagaaacaat
gaaaaaggaagaccggaatcaacagacaaaagaaatgtctttctttgattttgttctcaaatataatgactctgatattt
atatggttaatccagtgccagagtttatcaggtatttagctagatttcttacttctatgaaaaatcactag

Protein
Protein IDpfu_aug1.0_96977.1_64165.t1
Definition-
>pfu_aug1.0_96977.1_64165.t1
MFFLCSSYIVQSICVVIFLLKLCLSERILENEAGHLKPFGATNSVLDVERISGFPNPRTFFEKYAIPKRPLVMRDAAKVS
RAFHLWTDEYFYSAEGSKSHKVSTETMKKEDRNQQTKEMSFFDFVLKYNDSDIYMVNPVPEFIRYLARFLTSMKNH

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