Gene
| Gene Model ID | pfu_aug1.0_9719.1_24623 |
|---|---|
| Locus | scaffold9719.1 : 22380 ... 38463 : - |
| To GenomeBrowser | scaffold9719.1:22380..38463 |
| Genes list of scaffold | scaffold9719.1 |
| Synonym | pfu_aug2.0_609.1_30980 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9719.1_24623.t1 | 3 | 1 | AAA_21 | 7 | 29 | 6.4e-10 | 39.4 | 3.5e-06 | 0.0037 | 17.2 |
| pfu_aug1.0_9719.1_24623.t1 | 1 | 1 | ABC_tran | 8 | 145 | 1.8e-23 | 83.3 | 6.4e-26 | 6.8e-23 | 81.4 |
| pfu_aug1.0_9719.1_24623.t1 | 3 | 2 | AAA_21 | 81 | 173 | 6.4e-10 | 39.4 | 2.5e-06 | 0.0027 | 17.7 |
| pfu_aug1.0_9719.1_24623.t1 | 3 | 3 | AAA_21 | 225 | 270 | 6.4e-10 | 39.4 | 0.23 | 250.0 | 1.4 |
| pfu_aug1.0_9719.1_24623.t1 | 2 | 1 | ABC2_membrane | 271 | 366 | 1.6e-12 | 47.0 | 1.5e-15 | 1.6e-12 | 47.0 |
| pfu_aug1.0_9719.1_24623.t1 | 2 | 2 | ABC2_membrane | 408 | 421 | 1.6e-12 | 47.0 | 0.39 | 420.0 | -0.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9719.1_24623.t1 | gi|118092714|ref|XP_421638.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_9719.1_24623.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9719.1_24623.t1 ttgcatcttcaaaccaggaatgaatgccatcttaggtccaactggaagtggaaaatcatcattacttgatgtgttagcag gcagaaaagatccagcaggtttgaaagggacaatacttattgacggggcaccacctcctgataatttcaaatgcatggtt ggatatgttgtgcaggatgatgttgtcatgggaacccttagtgtgagggagaatttccatttctctgctgcactcagact gtccagtgtcgtaagtgctgaggaaaggaatgaaagagtagaaaatgtcatcaaagaacttggtcttactcattgtgcag acacaaaggtaggaacagagtttatcagaggagtatcagggggagagagaaagaggaccaacattggtatggagttgatt atctcccctcccgtcctatttcttgatgaaccaacaacaggactggacgccaatacggccaactctgtaatgttgttact aaaacgattggccatgaggggaaggaacattatcttttccatacaccaacctcgtttttccatataccgactgttcgata ccctaatgatgctatccctaggagaaactgtgtaccatggtccaacggaagaatctctggaattttttaaaacattagga tatgtaattgaggagcataacaaccctcctgacttctttttggatgttataaatggagacttcaatgtaacagcagagac tatggacatagagaagacaaatacgtcagatgaagaggaaatccatgacaaactgatccagacatacagatcatctatct ggaataaaagccatgaaaatgtcagtggtttctacagagtctccgcctacttcctctcaaagattgtttgtgatgtcatt ccaatgagattacttcccgttttagtattttctgtcgttacatacttcatgatcggatttgtggtagcagcaaacaaatt tttcctctacgtcttgaccctcttcctggtgtccactgcagcatcaggaatagccttcttcattagtgcttctgtcagaa tatacgccatagctaatctccttatagctctcagctatgtctttatgatggcactgacaatcactgaactgaaagatatg tcattttataatgcatcaggagtattatgcgacacgggtaacgagtaccttgcagatcaaggtattccatacgccactga ctgggatctatggtacaatgtgatggctcttatcatcttctctgttctcttcatgatcctggcctatgtacagctaagaa ggatcaagaaactcaagtag |
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Protein
| Protein ID | pfu_aug1.0_9719.1_24623.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9719.1_24623.t1 CIFKPGMNAILGPTGSGKSSLLDVLAGRKDPAGLKGTILIDGAPPPDNFKCMVGYVVQDDVVMGTLSVRENFHFSAALRL SSVVSAEERNERVENVIKELGLTHCADTKVGTEFIRGVSGGERKRTNIGMELIISPPVLFLDEPTTGLDANTANSVMLLL KRLAMRGRNIIFSIHQPRFSIYRLFDTLMMLSLGETVYHGPTEESLEFFKTLGYVIEEHNNPPDFFLDVINGDFNVTAET MDIEKTNTSDEEEIHDKLIQTYRSSIWNKSHENVSGFYRVSAYFLSKIVCDVIPMRLLPVLVFSVVTYFMIGFVVAANKF FLYVLTLFLVSTAASGIAFFISASVRIYAIANLLIALSYVFMMALTITELKDMSFYNASGVLCDTGNEYLADQGIPYATD WDLWYNVMALIIFSVLFMILAYVQLRRIKKLK |
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