Gene
| Gene Model ID | pfu_aug1.0_9724.1_31812 |
|---|---|
| Locus | scaffold9724.1 : 14269 ... 26485 : - |
| To GenomeBrowser | scaffold9724.1:14269..26485 |
| Genes list of scaffold | scaffold9724.1 |
| Synonym | pfu_aug2.0_353.1_10656 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9724.1_31812.t1 | 1 | 1 | VRR_NUC | 623 | 727 | 4.5e-20 | 71.5 | 6.7e-24 | 9.9e-20 | 70.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9724.1_31812.t1 | gi|348512943|ref|XP_003444002.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_9724.1_31812.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9724.1_31812.t1 atgtctgtatttatggaatggaataaaactgtgttgagaaaaggaaaattaagaatcaagtactttggagagaagtctcc attgaagaagagttggagtgatgctacagttaaaggtacattgaaaactgtcacacgacggctcagtctgaaaaaaagaa aatccacaaatttacagacagatgatgaaatgagatcaactgatacatcatctggatctcagaaagagaattctgggcta tcaaatactgcagcatcaacatctaaagagaaactatcaatgcgtaaacgtaaatcctcaggtacggcaagtgaagagga aactgaagggaaaaagacaaagaagagcgatggtgatattaactatgcatcagtggatagtactggaaggacatctgatt catgtaaagtgtctattgcaggaaaggttactagcaatataaacacagtaacagtttccatagatacaaagcagcaacaa tctaatgatagtcaagttgactctaaagtttcatttgaatctctgaaggatttaaaactctcacctgaaaaaagaatgaa gaaattgactgattcatcaggtaaaggatcttctgaagacgataaatctgatgtcaaaccaagctgtgataaagcagaat ctgacatttgtgatactgagaggagtgaatctgtgatacatacaattggagaaaataagatgaaacatagtaaactctct ttgaaaaagggagtgaaaaatgatgatgaaaataccggtataactgacattgaatccagacatagcaaagaaagagatca aattccttctgtaactccttatttttgttcagatactgattctattcctgatatgtcaaagggaacagtcattgaagata ataaagcagattacaaaagtaaggaagatgatgatgaagaggaggtgatacacacgccttactacctggaaaattttaga acaatattgaaaactgttttggaggacaaagataatctcaagctgtacagtcaacaggacatggttaccatcaccaactt tcatgaactgtctgatgaatctcaaaagctgtatgttagactgtttggcaggaagtgggcatggctggctgtatccagaa taaagtaccctgggatagccgaggatttatcaccaatcataaaggagttaactgtcactgggttcctactcacagattca gaactgacagagctagaacccaccttaaatcttcttcctgcaagtgatataaagtctctagccaagacatatcacttaaa tgtttctttgggtaaaaaagaactcataccactcctggtgaagaagagtaagcaaaacaccataggctctatgttcaagg ttgctgggcataatgcacagaatatcatgttaaagagagctaagaagatgttaggaggatgtcttcgtcttacggatgag ccacgtaaagtatttatacgaactctaatgttgttctcactcactgacacaatactggatgaagacatggccaatgggca ggctacacagctttttagaatgttacaagtgaatataggagcagttgtctatccaacttacactgtcaacaagcagacac atatctttcctgatagagaagctcttctaagattttcagaagcatccatattggatgcagaattgtggtcaaaattggag agaaacaactggaaggcagcatatgatgtgtactgtgaagctgaagaaagactgaaagaactcctcaaagattcaaaagt ggaaaaagcagacaagagtcttcccatgtttttacgaccatacactccggcaggtgtctatatgagaatcctgaatcagg gagtggaggagctgtgtgacttggtttctaaagtttgggaaaagaatttcaatgttttatgtataggcattaattgggag ctatttaaggacctcgaccatttacagggtcttatcaaatgttttggagggcagaggttggcaagtttattacaaagata tgcccaagatcccagacacactcgttcaggcttcccagatctgacactgtggaacccacaggagggtaccctgaaaatat cagaagtgaaaggacccggagacaggttgtcacacaaacagatactgtggttagactacctcatacaaagtggtgtggat gctgaagtctgccatgtcaaagctgtcagttcaaagagactggtacgatcaaatactgaagtgaaatga |
|
Protein
| Protein ID | pfu_aug1.0_9724.1_31812.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9724.1_31812.t1 MSVFMEWNKTVLRKGKLRIKYFGEKSPLKKSWSDATVKGTLKTVTRRLSLKKRKSTNLQTDDEMRSTDTSSGSQKENSGL SNTAASTSKEKLSMRKRKSSGTASEEETEGKKTKKSDGDINYASVDSTGRTSDSCKVSIAGKVTSNINTVTVSIDTKQQQ SNDSQVDSKVSFESLKDLKLSPEKRMKKLTDSSGKGSSEDDKSDVKPSCDKAESDICDTERSESVIHTIGENKMKHSKLS LKKGVKNDDENTGITDIESRHSKERDQIPSVTPYFCSDTDSIPDMSKGTVIEDNKADYKSKEDDDEEEVIHTPYYLENFR TILKTVLEDKDNLKLYSQQDMVTITNFHELSDESQKLYVRLFGRKWAWLAVSRIKYPGIAEDLSPIIKELTVTGFLLTDS ELTELEPTLNLLPASDIKSLAKTYHLNVSLGKKELIPLLVKKSKQNTIGSMFKVAGHNAQNIMLKRAKKMLGGCLRLTDE PRKVFIRTLMLFSLTDTILDEDMANGQATQLFRMLQVNIGAVVYPTYTVNKQTHIFPDREALLRFSEASILDAELWSKLE RNNWKAAYDVYCEAEERLKELLKDSKVEKADKSLPMFLRPYTPAGVYMRILNQGVEELCDLVSKVWEKNFNVLCIGINWE LFKDLDHLQGLIKCFGGQRLASLLQRYAQDPRHTRSGFPDLTLWNPQEGTLKISEVKGPGDRLSHKQILWLDYLIQSGVD AEVCHVKAVSSKRLVRSNTEVK |
|