Gene
| Gene Model ID | pfu_aug1.0_973.1_36752 |
|---|---|
| Locus | scaffold973.1 : 37546 ... 44185 : + |
| To GenomeBrowser | scaffold973.1:37546..44185 |
| Genes list of scaffold | scaffold973.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_973.1_36752.t1 | 2 | 1 | EF-hand_8 | 10 | 34 | 4.8e-19 | 67.7 | 2.8e-08 | 3.8e-05 | 23.2 |
| pfu_aug1.0_973.1_36752.t1 | 2 | 1 | EF-hand_1 | 14 | 42 | 1.5e-18 | 64.6 | 7.3e-14 | 9.8e-11 | 40.1 |
| pfu_aug1.0_973.1_36752.t1 | 2 | 1 | EF-hand_6 | 14 | 43 | 2.2e-12 | 45.7 | 2.1e-13 | 2.9e-10 | 39.1 |
| pfu_aug1.0_973.1_36752.t1 | 1 | 1 | EF-hand_7 | 15 | 69 | 9.5e-19 | 67.3 | 9.7e-22 | 1.3e-18 | 66.8 |
| pfu_aug1.0_973.1_36752.t1 | 2 | 1 | EF-hand_5 | 15 | 39 | 1.4e-11 | 43.1 | 1.5e-10 | 2.0e-07 | 30.0 |
| pfu_aug1.0_973.1_36752.t1 | 2 | 2 | EF-hand_8 | 27 | 69 | 4.8e-19 | 67.7 | 1.8e-16 | 2.4e-13 | 49.4 |
| pfu_aug1.0_973.1_36752.t1 | 2 | 2 | EF-hand_1 | 50 | 69 | 1.5e-18 | 64.6 | 2.9e-08 | 3.9e-05 | 22.6 |
| pfu_aug1.0_973.1_36752.t1 | 2 | 2 | EF-hand_5 | 54 | 68 | 1.4e-11 | 43.1 | 0.00012 | 0.16 | 11.3 |
| pfu_aug1.0_973.1_36752.t1 | 2 | 2 | EF-hand_6 | 56 | 68 | 2.2e-12 | 45.7 | 0.025 | 33.0 | 4.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_973.1_36752.t1 | gi|354496917|ref|XP_003510570.1| | 1.0e-30 |
Transcript
| Transcript ID | pfu_aug1.0_973.1_36752.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_973.1_36752.t1 atgatggctagatcgatgaaggaatctgactcagacgaagaacttcgtgaagccttcagagtgttcgacaaagacggaaa cggatacattagtgctgctgaactacgtcacgtgatgacgaatctcggagaaaaactcacagatgaagaagtggacgaga tgatacgagaagctgatattgatggcgacggtcaagttaattatgaaggtagaacagttgaacgaggagcaaattgcagg taa |
|
Protein
| Protein ID | pfu_aug1.0_973.1_36752.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_973.1_36752.t1 MMARSMKESDSDEELREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGRTVERGANCR |
|