Gene
| Gene Model ID | pfu_aug1.0_974.1_22395 |
|---|---|
| Locus | scaffold974.1 : 4786 ... 23150 : + |
| To GenomeBrowser | scaffold974.1:4786..23150 |
| Genes list of scaffold | scaffold974.1 |
| Synonym | pfu_aug2.0_787.1_24406 |
Manual annotation
| Study field | Environmental Response |
|---|---|
| Gene name | ecdysis triggering hormone receptor subtype B -like |
| Description | N-terminal: XP_002611951.1 hypothetical protein BRAFLDRAFT_91835 [Branchiostoma floridae] >gb|EEN67960.1| hypothetical protein BRAFLDRAFT_91835 [Branchiostoma floridae] 63.5 63.5 91% 2e-08 28%C-terminal:ABI93274.1 ecdysis triggering hormone receptor subtype B [Aedes aegypti] 147 147 39% 7e-35 32%NACHT 53 220 1.4e-16 60.4 3.1e-19 6.0e-16 58.3AAA_22 55 185 0.0036 17.3 3.7e-06 0.0072 16.37tm_1 366 628 2.70002e-41 141.2 2.24208e-44 4.39994e-41 140.67TM_GPCR_Srsx 362 614 1.0e-06 28.0 5.2e-10 1.0e-06 28.0DUF205 Superfamily |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_974.1_22395.t1 | 2 | 1 | NACHT | 53 | 220 | 4.0e-17 | 62.3 | 8.5e-20 | 1.8e-16 | 60.2 |
| pfu_aug1.0_974.1_22395.t1 | 2 | 2 | NACHT | 273 | 304 | 4.0e-17 | 62.3 | 0.69 | 1500.0 | -1.3 |
| pfu_aug1.0_974.1_22395.t1 | 1 | 1 | 7tm_1 | 366 | 628 | 2.89999e-41 | 141.3 | 2.24208e-44 | 4.69996e-41 | 140.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_974.1_22395.t1 | gi|115292720|gb|ABI93274.1| | ecdysis triggering hormone receptor subtype B [Aedes aegypti] | 5.0e-33 |
Transcript
| Transcript ID | pfu_aug1.0_974.1_22395.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_974.1_22395.t1 atgggacaatatcctctggagctgatgtattcagatgtaaggattatggaaaatgttcactatgaatcacagagaatgaa caatgatcaacgacaaggaaaagaaatgaaatctataagggatatcttgtacaaaaataatgaaccagcacagcgaagtt tcttacttgggaaggcaggtggaggtaaaactgtattttgccagtggctttttaaagaatggggcaacgtccaagaaccc gcagaaagaccggtcagaaaatatgcagaatgtttggctgaattcgattttgttttctttgttaagtttcgcagtgtaaa tcggacattatccaatgttgctgacatgatatgtcatgataatttcaggtatgaaaaaggctgtcatcaaactgttcagc acgtgcttgcaagcgatgaatatcggtgtcttattatactggacggtctcgatgaatggagaccaaacaaacatgcaaaa gaggaattagttcatcaacatataccaaatattgaggacgtatctaactgcacattccttttctcaagccgaccgtggaa atttgattttattttagataccttacgcagtgatgatcaagtcatagaaattcaaggctttgatgggaatgggataaaaa aaatcacgagagacattctaatcaatcactacaaattgagtccgaattcatttgaattcgaagacaaatttgatatgata atggatatatataagaaagaaaaaagctccatgcaagttcccttgctcactgtcatagttatacaatcgtttatagaaga gaaagatacagagaaaagtttgacatgtttctatatgactttgatcgaaattcttttaaaaaagtatcatcaaagccatg ctgtgagcgaggaaatgaaagaagtttgcaaagcaaacttgaacattggaccattagaaaattttcggagatacaagatg tcttcacaattcattaatgttttggtagatttaggcaaagttgcctacaatgatcttaataaaaatgccattaaggacgg ggagatgtcggcaagaaaagaaatagcacgttttgaaaggaacttgggactagtcgggaacatttacatcatagctttgg tgtgtggacgacgacagattaggaccaagatgagtttactatttatgaaccttagtatcacagacttgctagtattaatg acaagtatgcccctgtttgccatgggtgtatatactaaggcggtatggtatttcggtgacgtagcatgcagattctccta cttcctagagagtgcagtgatattggcatcagctttaacaatacttgttataggtgttgacagatactttgcaatatgca aatcaacgactgataacgctcggaagagactcagtgtagccaggaagataataggaatttggacattagcaagtttgagt agtgttccctgtgcatttattgtgaatcttcagggtggaatatataatgaaggcactacttcagaaacgtgttatctaat ccttgatagaaaatggaaatttgcttactttatatcgatgtcagttgtattcttctttcttattttcctggtactgctgt ttttgatacaaagaatgtcatcgtttctactcccagagtctaatttgtttgaaggacaaatccaagcaaagagaatccgg gaacgcagaagagttgtatttatgctatttttggttgttatttgctttttcgcttgtgtccttcctgttcgcttgttgat gatttcgtttgtattggacgaaggaaaaacaatcactagacttggaattgaagcattcgcaaatcttaatatttccctcc ggatgctgatgtatttgaacagcgcacttaaccctgtcatctacaacctgtcaaccagcatcagaaaagtgaccgtcagt ttactacgtaaatggtgcatactctgtaagacgctgcaaagatatggtgtagacaatcaggaggcagaaatgaaccatag aaatccagaaatacccgccagacaaggagagtttaatcttggtcagatatcgattattccatacaacaaacagtga |
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Protein
| Protein ID | pfu_aug1.0_974.1_22395.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_974.1_22395.t1 MGQYPLELMYSDVRIMENVHYESQRMNNDQRQGKEMKSIRDILYKNNEPAQRSFLLGKAGGGKTVFCQWLFKEWGNVQEP AERPVRKYAECLAEFDFVFFVKFRSVNRTLSNVADMICHDNFRYEKGCHQTVQHVLASDEYRCLIILDGLDEWRPNKHAK EELVHQHIPNIEDVSNCTFLFSSRPWKFDFILDTLRSDDQVIEIQGFDGNGIKKITRDILINHYKLSPNSFEFEDKFDMI MDIYKKEKSSMQVPLLTVIVIQSFIEEKDTEKSLTCFYMTLIEILLKKYHQSHAVSEEMKEVCKANLNIGPLENFRRYKM SSQFINVLVDLGKVAYNDLNKNAIKDGEMSARKEIARFERNLGLVGNIYIIALVCGRRQIRTKMSLLFMNLSITDLLVLM TSMPLFAMGVYTKAVWYFGDVACRFSYFLESAVILASALTILVIGVDRYFAICKSTTDNARKRLSVARKIIGIWTLASLS SVPCAFIVNLQGGIYNEGTTSETCYLILDRKWKFAYFISMSVVFFFLIFLVLLFLIQRMSSFLLPESNLFEGQIQAKRIR ERRRVVFMLFLVVICFFACVLPVRLLMISFVLDEGKTITRLGIEAFANLNISLRMLMYLNSALNPVIYNLSTSIRKVTVS LLRKWCILCKTLQRYGVDNQEAEMNHRNPEIPARQGEFNLGQISIIPYNKQ |
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