Gene
| Gene Model ID | pfu_aug1.0_9746.1_31816 |
|---|---|
| Locus | scaffold9746.1 : 1 ... 17334 : + |
| To GenomeBrowser | scaffold9746.1:1..17334 |
| Genes list of scaffold | scaffold9746.1 |
| Synonym | pfu_aug2.0_490.1_00810 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9746.1_31816.t1 | 1 | 1 | RVP | 268 | 358 | 4.1e-06 | 26.6 | 5.9e-09 | 1.5e-05 | 24.8 |
| pfu_aug1.0_9746.1_31816.t1 | 1 | 1 | RVT_1 | 591 | 711 | 4.7e-10 | 39.1 | 4.0e-13 | 1.0e-09 | 38.1 |
Transcript
| Transcript ID | pfu_aug1.0_9746.1_31816.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9746.1_31816.t1 gtaagcttttccaagttttccttgacaattatagcaaatatttatattcttactcaggatttcattttcgccaaaaatga ttcgcccttcagggaatttgccaatgttaatattatagaacaatccatggacgggtctagaaaatttttcaaaaaagatg tgaggagttgttccgtgagcgacccagggcataatactggagctagtaatacgggagccacagcacggcgctctatttcg attatattaaacagaagtagggcagatcagagtagttttggataccggaagagcattgtaaagcctgcaacatacgacgg gaagtcttcctggatagactttaagtcccactttgacatatgtgcggacttgaatgaatggaccactgatgaaaaaggga tgtaccttgcagttacattacgcggtggtgcacaggcggtattaggttacttacctgccgcgtcacgtaaagattttact gagctctgcaaagcactagaagacagatatgcccccgccaaccagatggacttgtacagggctcaacttaaggacaggaa acaaaaggcttcagagtctgtccccgagttagggcaagatgttcggaggctgacaaacttagcgtatgctaaggcaccct ctgatgtacgcgaaactcttgccatggaatactttatagatgcattacacagttccgacatgcgtctcagaattaagcaa tcaagacccaagtctttgaatgaggctgtctgccttgcggttgaattagatgcatttaataatgcagaaaagagcagaca agaaataggagtcaatgacaaagcagcaaaactgttggtgcacacaggagcaacagtgacgatagtttcacctgagatag cgggtaatagaccaattgatgagctccataccaacgtgcttgttgctgatgggactcctctgagaattaaggggaagacg acattgcctgtatctgtagacggcgtatgtacagatcacaatgttgttgtagcagacattggtattgaaggtatacttgg cctggactttatgaagagtcacacctgtcacattgacattgtcaacaattctattactctggatggacgctcagtcaata tgaatatggaagttcaagtcggttgttaccgagttctactggagcagtcagtacatgttccatccatgtcagaagtactc actctttgtcgtgttcagacaatagatggcaaagttgtatctaatcttgggattggcatggtagaacctatagaaagttt cacaaagtcagaccgtggcataacagccagaactctgactgacagcccagataaagtaccagtgcgtataatgaacgtgc aaaacactgaccaaaccatcaagaaaggcacttgtgttgcacagtatacacctgtagctgaggtgttcgtccatgacagt tttctacctggagagaaaacagcagtgcctggtcatttgaaagatctgtacgaggatacgaaatcaagactcagtaatga ccagagtgttgagtttgaaatgttcctcattaagtaccaaagtttgttcgccaaagacgacttggacttgggtagagcgg agtcaatcaagcatcgcataaatacaggggatacacatcctattaagcaagctcctaggcgtttacctgaacatatacac gctgaagtagaaaagcatatagatgctatgcttgagaagaaggtcatacatccctcaaagagcccctggtcatctccaat agtattagccaaaaagaaagatggctcaacacgcttctgtgttgactaccgcaaactgaatgatgtaacaataaaggatg cttatcatttgcctctcattcaggagtggcttgatcatctttctggtgccaagtggttctctaccctcgacctatgcatg ggatactgtcaggtggcagtcaatgatgatgacagagagaagactgcatttgcgacaaggaaaggcctctttgaattctc agtcatgcctttcgggctttgcaacgcccctgccacattccaaagactaatggaatcagtacttcgtggattacagtttg agacttgccttgtctatttagatgacataattgttgtggaggctggaataactacaagcagtgtcaagacgcaatccatt gtcaactggccagttcctcagaacgtatctgaagtgagatctttcttgggattatgcagctattatagacggtttgtacc caactttgcttcagtagctgatcctttacacaagttgacaaagaaaggaaccgattttgtttggacagaagctagtcaaa acgcatttgacagactgagagaagctttgacatcatcacctatcctggcaaatccagatctatctcagcctttcatactg gacactgatgccagcgagcaatcaataggtgcagtactgtcacagaacataaatggatccgagagggtttgtgcttacgc tagcagaactttgtcaaagtcggagcgcaaatactgtgtaactcgcaatgagcttctggctgtcgttcacttccgacaga cttcgttaagcattttcgccattacctatatggaaaaaagttcctcatacggacagaccacagctctctgcgctggctca tgcagttcaagaacccggaaaaccaattag |
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Protein
| Protein ID | pfu_aug1.0_9746.1_31816.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9746.1_31816.t1 VSFSKFSLTIIANIYILTQDFIFAKNDSPFREFANVNIIEQSMDGSRKFFKKDVRSCSVSDPGHNTGASNTGATARRSIS IILNRSRADQSSFGYRKSIVKPATYDGKSSWIDFKSHFDICADLNEWTTDEKGMYLAVTLRGGAQAVLGYLPAASRKDFT ELCKALEDRYAPANQMDLYRAQLKDRKQKASESVPELGQDVRRLTNLAYAKAPSDVRETLAMEYFIDALHSSDMRLRIKQ SRPKSLNEAVCLAVELDAFNNAEKSRQEIGVNDKAAKLLVHTGATVTIVSPEIAGNRPIDELHTNVLVADGTPLRIKGKT TLPVSVDGVCTDHNVVVADIGIEGILGLDFMKSHTCHIDIVNNSITLDGRSVNMNMEVQVGCYRVLLEQSVHVPSMSEVL TLCRVQTIDGKVVSNLGIGMVEPIESFTKSDRGITARTLTDSPDKVPVRIMNVQNTDQTIKKGTCVAQYTPVAEVFVHDS FLPGEKTAVPGHLKDLYEDTKSRLSNDQSVEFEMFLIKYQSLFAKDDLDLGRAESIKHRINTGDTHPIKQAPRRLPEHIH AEVEKHIDAMLEKKVIHPSKSPWSSPIVLAKKKDGSTRFCVDYRKLNDVTIKDAYHLPLIQEWLDHLSGAKWFSTLDLCM GYCQVAVNDDDREKTAFATRKGLFEFSVMPFGLCNAPATFQRLMESVLRGLQFETCLVYLDDIIVVEAGITTSSVKTQSI VNWPVPQNVSEVRSFLGLCSYYRRFVPNFASVADPLHKLTKKGTDFVWTEASQNAFDRLREALTSSPILANPDLSQPFIL DTDASEQSIGAVLSQNINGSERVCAYASRTLSKSERKYCVTRNELLAVVHFRQTSLSIFAITYMEKSSSYGQTTALCAGS CSSRTRKTN |
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