Gene
| Gene Model ID | pfu_aug1.0_977.1_36759 |
|---|---|
| Locus | scaffold977.1 : 108263 ... 122255 : - |
| To GenomeBrowser | scaffold977.1:108263..122255 |
| Genes list of scaffold | scaffold977.1 |
| Synonym | pfu_aug2.0_63.1_10212 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_977.1_36759.t1 | 1 | 1 | Cpn60_TCP1 | 10 | 302 | 0.0 | 321.9 | 0.0 | 0.0 | 321.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_977.1_36759.t1 | gi|156368061|ref|XP_001627515.1| | predicted protein [Nematostella vectensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 2 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 2 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_977.1_36759.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_977.1_36759.t1 atgccgaacgttaatttatgtaaggggcgtatagaaaaacctaggattctattattggattgtaatttagaatacaagaa aggagagagtcagacaaacatagaaataactaaagaagaagatttcagtaaaatccttcagatggaagaagaattcgtaa ggaagatgtgtgatgaagtaatcgctgtcaaacctgacttagtaatcacagaaaaaggtgtgtccgatctggctcagcat ttcctggtcaaggccggtataagctgtatacgacgtgtcagaaagtccgataataacaggatagcaagggtttgtggagc taccattgtaaataggacggatgaaatccgtgaggaagatgttggtacagactgtggcttgttttacatcgagaaaatag gagatgaatattttaccttcttggttgagtgtaagaatcctaaagcttgtacgatcctgctccgaggggccagtaaggac atcttgatggaggtagagagaaacctccaggatgccatgaacgtggctcgtaatgttctgttagaacccctccttgttcc agggggaggggcagcagaaatggcagctgctcaggtattgaatgaaaaagccaagagtatcaaaggtgttcatcagtggc cgtacaaagccgtcaatcgagcccttgaggtcatccctcgtacactcatacagaactgtggagcaaataccatcagaact ataactgcattaagggctaagcatgcatcaccaaacaatacaacatggggtattgatggagagactggtaaaatagtcga catgaaggaatatggaatctgggaaccttttgctgtcaagtctcaaatttacaaaactgcaatagagacagcagtattat tactgaggattgacgacatcgtatcaggaacaaagaaacagagtgacgctgctgctggcggacgacccgctggacctacc ggagaagacgcccctcaagcttccgagggtcctgatccttga |
|
Protein
| Protein ID | pfu_aug1.0_977.1_36759.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_977.1_36759.t1 MPNVNLCKGRIEKPRILLLDCNLEYKKGESQTNIEITKEEDFSKILQMEEEFVRKMCDEVIAVKPDLVITEKGVSDLAQH FLVKAGISCIRRVRKSDNNRIARVCGATIVNRTDEIREEDVGTDCGLFYIEKIGDEYFTFLVECKNPKACTILLRGASKD ILMEVERNLQDAMNVARNVLLEPLLVPGGGAAEMAAAQVLNEKAKSIKGVHQWPYKAVNRALEVIPRTLIQNCGANTIRT ITALRAKHASPNNTTWGIDGETGKIVDMKEYGIWEPFAVKSQIYKTAIETAVLLLRIDDIVSGTKKQSDAAAGGRPAGPT GEDAPQASEGPDP |
|