Gene
| Gene Model ID | pfu_aug1.0_9778.1_02801 |
|---|---|
| Locus | scaffold9778.1 : 2836 ... 12985 : - |
| To GenomeBrowser | scaffold9778.1:2836..12985 |
| Genes list of scaffold | scaffold9778.1 |
| Synonym | pfu_aug2.0_164.1_13713 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9778.1_02801.t1 | 3 | 1 | GATase_2 | 2 | 29 | 5.5e-06 | 25.3 | 0.66 | 1200.0 | -2.2 |
| pfu_aug1.0_9778.1_02801.t1 | 1 | 1 | GATase_6 | 41 | 155 | 4.3e-21 | 75.2 | 7.3e-24 | 1.4e-20 | 73.6 |
| pfu_aug1.0_9778.1_02801.t1 | 1 | 1 | GATase_7 | 49 | 165 | 1.3e-26 | 92.7 | 1.4e-29 | 2.7e-26 | 91.7 |
| pfu_aug1.0_9778.1_02801.t1 | 3 | 2 | GATase_2 | 67 | 87 | 5.5e-06 | 25.3 | 0.00049 | 0.91 | 8.1 |
| pfu_aug1.0_9778.1_02801.t1 | 3 | 3 | GATase_2 | 114 | 161 | 5.5e-06 | 25.3 | 6.7e-06 | 0.012 | 14.2 |
| pfu_aug1.0_9778.1_02801.t1 | 1 | 1 | Asn_synthase | 228 | 460 | 0.0 | 218.8 | 0.0 | 0.0 | 217.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9778.1_02801.t1 | gi|291225664|ref|XP_002732808.1| | PREDICTED: asparagine synthetase [glutamine-hydrolyzing]-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_9778.1_02801.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9778.1_02801.t1 atgtgcggtatttgggccatatttggcagtgatgatgacgtatcaattcagtgcaatgccgctcacaaaatcacacacag aggtcccgatgccttccgattggagaccatccattacttccccacgtgttgtctcgggtttcatcgacttgccatcgttg acgatttggcgggaatgcagcctatgagattatacaaacatcctcatatatggttaatatacaacggtgaaatatacaac cataaactgataacagaagaatttggctttgagcgaagtacagaatgtgacggagaggtgataatccatcttttcgtaga aggtggtattgaatttgccgccaaacatttagatggcgtcttcgcgttcgtgctcctcgacactgccaacagaaaggttt atcttggtagagacacgtttggcgtcagaccaatgttcagagtcactgatgaaaatggttttatggccgtgtgttcagag gctaaaggattgatgacactttcacaagcccagaaaccaggttcagtaattgaacctttccctcctggtcaagtagaaac ataccatcttgaccagataggtaaagcgacgtttgtagagagagcgacattccacaagataggggaacatcctgcatata aaaccctgatcaatcctatagacgatgatgtatccgaaagtttacgtcagctcctagagggcgctgtctccaagcgtctg atgtcagatagaagaataggctgtatgctttcaggaggtctagattcaagtctggtagcagcattagttgttaaaaagtc aaaggagatgggagtgacatacccaatacaaacgttttccattggtatggagaacagccccgatctactcgcagcaagaa aggtagctaaacatataggtacagatcaccatgaaatcgtcatgacaccagaggagggtatatcagcaatagacagcgtt atataccacctggagagctatgatataacaacagttagggcatcagtgggtatgtatctagtcagtaaatacataaagga gaagacggacaccacggtggtactgtcaggagagggagctgatgaagtcatgcagggttatatctacttccataaagcgc cctctgccgacgcagccgatactgagagcagacgactctgtaaggatctatatgtgtatgatgtacttcgtggagaccga actacagcagcatgggggttagaaattagagttccattccttgatcaccgtcttagcagctacttcttgtccattactcc atccagtaaacaacctcagcaaggcaaagagaagtatttactgaggtctgcattctctgacactggtctattacctagtg acatactatggagaccaaaggaggcttttagtgatggtattacctcagttaaaaggtcatggtttgaaattcttcaagat catatagaagaacaaataaatgatagtgaattacaagacgccagtgcaatatatccccataacacaccggtgacaaagga agccctctactaccgaaagatatttgagaaatactaccccgaaaagtcagcctggattccgtacttctggatgcccaaat ggtccacttcaagcgatccgtcagcgagaacattgaagcattataaataa |
|
Protein
| Protein ID | pfu_aug1.0_9778.1_02801.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9778.1_02801.t1 MCGIWAIFGSDDDVSIQCNAAHKITHRGPDAFRLETIHYFPTCCLGFHRLAIVDDLAGMQPMRLYKHPHIWLIYNGEIYN HKLITEEFGFERSTECDGEVIIHLFVEGGIEFAAKHLDGVFAFVLLDTANRKVYLGRDTFGVRPMFRVTDENGFMAVCSE AKGLMTLSQAQKPGSVIEPFPPGQVETYHLDQIGKATFVERATFHKIGEHPAYKTLINPIDDDVSESLRQLLEGAVSKRL MSDRRIGCMLSGGLDSSLVAALVVKKSKEMGVTYPIQTFSIGMENSPDLLAARKVAKHIGTDHHEIVMTPEEGISAIDSV IYHLESYDITTVRASVGMYLVSKYIKEKTDTTVVLSGEGADEVMQGYIYFHKAPSADAADTESRRLCKDLYVYDVLRGDR TTAAWGLEIRVPFLDHRLSSYFLSITPSSKQPQQGKEKYLLRSAFSDTGLLPSDILWRPKEAFSDGITSVKRSWFEILQD HIEEQINDSELQDASAIYPHNTPVTKEALYYRKIFEKYYPEKSAWIPYFWMPKWSTSSDPSARTLKHYK |
|