Gene
| Gene Model ID | pfu_aug1.0_9778.1_02802 |
|---|---|
| Locus | scaffold9778.1 : 16154 ... 31585 : - |
| To GenomeBrowser | scaffold9778.1:16154..31585 |
| Genes list of scaffold | scaffold9778.1 |
| Synonym | pfu_aug2.0_10559.1_33088 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9778.1_02802.t1 | 1 | 1 | GATase_6 | 16 | 90 | 3.9e-12 | 46.2 | 6.6e-15 | 1.6e-11 | 44.2 |
| pfu_aug1.0_9778.1_02802.t1 | 1 | 1 | GATase_7 | 18 | 96 | 2.3e-17 | 62.9 | 3.1e-20 | 7.6e-17 | 61.2 |
| pfu_aug1.0_9778.1_02802.t1 | 1 | 1 | Asn_synthase | 149 | 294 | 6.3e-35 | 120.8 | 3.4e-38 | 8.3e-35 | 120.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9778.1_02802.t1 | gi|260811890|ref|XP_002600654.1| | hypothetical protein BRAFLDRAFT_102435 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_9778.1_02802.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9778.1_02802.t1 atgctgaaaggaaacgcatttccatacacctttaatcataagatttctaaagactttggtttccagagaagaacggagtg tgatagtgaagttattatacacttatacgtaaaaggtggcattgaatttgccgccaaacaattggatggcgtctttgcgt tcgtgctgcttgacaccaacaaacgaaaagtttatctcgggagggacacctttggtatcagacctatgttcaagttacaa aatgcacatggaattctcgctgtttgctcggaggcaaaaggcttgttggaattacaacaagacgaccattcggataaaat agaacctttttctcctggtcaggttgaagcttacgaccttcaacaagacggaaatgcaagatttacagagaagaaaacat ttcacgcaattggggaacagcctaattacaatacatctatatctttccttggtggtttagattcaagccttgttgccgca ttagttgcaaagaaagctagggaaaatggtatgacgtaccccattcaaacattttctattggcttggagaatagtcctga tctcctggcagctagtaaggttgctagccacatcggttcagagcatcatgaaataatcatcacagaagaagaagcccttt ctgtcattaacgatgtcatctaccatttagaatgttatgacccaatcaccatcaggtcttcagtcccaatgtacttactg ggtaaatacataaaggagaagacggacaccacagtggtactgtcaggagagggggctgatgaggtcatgcagggttatat ctactttcacaaagcgccctctgccgacgcagccgatgccgagagcagacgactctgtaaagacctgtatatatatgacg tgttacgtggagacagaactatagcagcttgggggtaa |
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Protein
| Protein ID | pfu_aug1.0_9778.1_02802.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9778.1_02802.t1 MLKGNAFPYTFNHKISKDFGFQRRTECDSEVIIHLYVKGGIEFAAKQLDGVFAFVLLDTNKRKVYLGRDTFGIRPMFKLQ NAHGILAVCSEAKGLLELQQDDHSDKIEPFSPGQVEAYDLQQDGNARFTEKKTFHAIGEQPNYNTSISFLGGLDSSLVAA LVAKKARENGMTYPIQTFSIGLENSPDLLAASKVASHIGSEHHEIIITEEEALSVINDVIYHLECYDPITIRSSVPMYLL GKYIKEKTDTTVVLSGEGADEVMQGYIYFHKAPSADAADAESRRLCKDLYIYDVLRGDRTIAAWG |
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