Gene
| Gene Model ID | pfu_aug1.0_9790.1_02814 |
|---|---|
| Locus | scaffold9790.1 : 46116 ... 54511 : + |
| To GenomeBrowser | scaffold9790.1:46116..54511 |
| Genes list of scaffold | scaffold9790.1 |
| Synonym | pfu_aug2.0_386.1_20713 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9790.1_02814.t1 | 1 | 1 | Tctex-1 | 109 | 207 | 1.2e-23 | 82.8 | 2.4e-27 | 1.8e-23 | 82.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9790.1_02814.t1 | gi|291223555|ref|XP_002731775.1| | PREDICTED: tctex1 domain-containing protein 1-B-like, partial [Saccoglossus kowalevskii] | 2.0e-23 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantle | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_9790.1_02814.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9790.1_02814.t1 atgtcattccagtcagctaagttgaagccagtgcctccggaggccgataatgacaagaaatcagtcataggagaaggaga gcgcaaaggcagtatcagcgaaaagcgcaagatgagcgtctcacagaaaaaaccgacggggcccatcaaccccaaaaata tccagtccgttacggggtcatctttggctggatttatggccaccaaaagatttatcaaaagattttctcagaaaaatcgc gacagatctgcctcctctgtgaatctgccgcccaaggagatggaaccgacgtacagaatggcgcccaagaaaaggttcaa cgtgacagacgtggaagatctcctaaagcgcaccgtggattctaaattcatagatatgcaataccacaggaagtatgctc ctacgatgacaagagtactctctaacgaaataaaggagaagctcaaagagttgaaatacgaacgctacaagtgggtgtgt gtagtgcaattgggggaagtgaaagaccaaggaatggtatctacaagcaggtgcgcgtgggacaaaaacaacgacaactt cgcttcctattattacaaaaacagatctatctatgtaaatgtgacagtatttggagtttatagggaataa |
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Protein
| Protein ID | pfu_aug1.0_9790.1_02814.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9790.1_02814.t1 MSFQSAKLKPVPPEADNDKKSVIGEGERKGSISEKRKMSVSQKKPTGPINPKNIQSVTGSSLAGFMATKRFIKRFSQKNR DRSASSVNLPPKEMEPTYRMAPKKRFNVTDVEDLLKRTVDSKFIDMQYHRKYAPTMTRVLSNEIKEKLKELKYERYKWVC VVQLGEVKDQGMVSTSRCAWDKNNDNFASYYYKNRSIYVNVTVFGVYRE |
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