Gene
| Gene Model ID | pfu_aug1.0_9822.1_02821 |
|---|---|
| Locus | scaffold9822.1 : 18266 ... 31270 : + |
| To GenomeBrowser | scaffold9822.1:18266..31270 |
| Genes list of scaffold | scaffold9822.1 |
| Synonym | pfu_aug2.0_1267.1_24822 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9822.1_02821.t1 | 1 | 1 | Sec16 | 382 | 464 | 1.6e-17 | 63.5 | 7.1e-21 | 5.2e-17 | 61.8 |
| pfu_aug1.0_9822.1_02821.t1 | 1 | 1 | Sec16_C | 534 | 577 | 1.7e-06 | 28.0 | 4.6e-10 | 3.4e-06 | 27.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9822.1_02821.t1 | gi|197245681|gb|AAI68630.1| | Unknown (protein for IMAGE:7681019) [Xenopus (Silurana) tropicalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_9822.1_02821.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9822.1_02821.t1 atgtctgaaaatagatcgtcagtcggacgaattggtctcaattctaggtcgtcccacagctctctcagtaagggtcaagg ttacttttctcaaggtcaggaacaaaatggaacttctgagcaacaaaattaccaaggacaatattatcaatatggcaatg gacaaatgcagtatgggtatgatcagactcagaatatggatgcaaatcaacaatattataatcctgggcaatactgggat cccaatcaacagtggcagaattataatcaacagtcatatgagcagtatcaaggtcaaggtcaacaatggacaaatcaaga atatgacccttctggaggaaattctcttaatgtgcatgccgaacagtttgtgccaaataattatcaacaggcgggatatg atgctagtcaaggtcaaggtcatataaatcaggaacaaataggtcaaggttatggagaagatgatagtttagatcagtca catgcgtcggtcacatctgagagtagtacaagttatagtcaatctaatgacacttcaggacttggtggatttttccacgg tgatagtgtatcagattcttgtgggactagtatgaatagtggagtattcgacgataaaagtaaagcgcaggagcataaag atagtgaacaagagcatatacaatctgaatttagtaatgaaagtttacgtactgtgaattattcatcggcatcgcttcca gtttcacaacaaggtgatgaaattaatgccataacttcccaagtgcaagaaatttctctgacaacagataccgagaatca taacgtatctagtgtacaagataatgtgatacaaaccttctcctccaaccagccagtttctcattacaaccaacagcaca gtgcacctcatcaagagggcgtgtctacaggcgtaccagaaacatcgtcagggggaagtcagaattctgaggggctgagt gactgggaggttgtcccccctcagacactgtccgtacctggacatcagagtagagagggctctacacatagtagggaagg atccatagataacaatgtgcaattctttataggatcgagtcgtaactcagacgagggcacaccagagtctttcatgcagc tggtcaaggtcttaccaaaccggccagctgatggggaacctgccacagtggaaatacacgacatctctcaggtgttgcag gataacctagaaactgatgagctcaagtcctttcctgggcctcttgttagaggtgacacacataagaatgatgtgttggt gttctgtcagcgtaaagctaaggaatgtctggataatgtacagatgatggacagagagtcggcagccttaatatggaaat atcttgaacttctcatcaaacaaaatgggacatgtgttggaacagatgtggccgatctattgttagaaggtcatgaacct acgactgtagactatagcatgatgggattgagaatacagagtcaggataacttggatgaggaactgaatgaaaccacgga aaccaatttctccatggtaactgccgataggtctgttataaacaggggcaagaaaagtgtggaggaggttacagacagat ttagacatctgcttttatacggcaggaaaaaggatgctctagaatgggccatgaagaatggtttgtggggccatgcttta ttccttgccagtaaaatggactcacgagcacatgccaatgtcatgacaaggagaatcatccaagctttgattaattattc ttcgtaa |
|
Protein
| Protein ID | pfu_aug1.0_9822.1_02821.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9822.1_02821.t1 MSENRSSVGRIGLNSRSSHSSLSKGQGYFSQGQEQNGTSEQQNYQGQYYQYGNGQMQYGYDQTQNMDANQQYYNPGQYWD PNQQWQNYNQQSYEQYQGQGQQWTNQEYDPSGGNSLNVHAEQFVPNNYQQAGYDASQGQGHINQEQIGQGYGEDDSLDQS HASVTSESSTSYSQSNDTSGLGGFFHGDSVSDSCGTSMNSGVFDDKSKAQEHKDSEQEHIQSEFSNESLRTVNYSSASLP VSQQGDEINAITSQVQEISLTTDTENHNVSSVQDNVIQTFSSNQPVSHYNQQHSAPHQEGVSTGVPETSSGGSQNSEGLS DWEVVPPQTLSVPGHQSREGSTHSREGSIDNNVQFFIGSSRNSDEGTPESFMQLVKVLPNRPADGEPATVEIHDISQVLQ DNLETDELKSFPGPLVRGDTHKNDVLVFCQRKAKECLDNVQMMDRESAALIWKYLELLIKQNGTCVGTDVADLLLEGHEP TTVDYSMMGLRIQSQDNLDEELNETTETNFSMVTADRSVINRGKKSVEEVTDRFRHLLLYGRKKDALEWAMKNGLWGHAL FLASKMDSRAHANVMTRRIIQALINYSS |
|